RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 OR2V1Q8NHB1 315 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 RP9Q8TA86 221 aaKnown RBP13.25□□□□□ -0.29
USB1-203ENST00000539737 GPR119Q8TDV5 335 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 GTPBP3Q969Y2 492 aaKnown RBP13.25□□□□□ -0.29
USB1-203ENST00000539737 ADGRG7Q96K78 797 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 RNF145Q96MT1 663 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 SH3GL1Q99961 368 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 THUMPD3Q9BV44 507 aaKnown RBP13.25□□□□□ -0.29
USB1-203ENST00000539737 IKZF5Q9H5V7 419 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 TMEM38AQ9H6F2 299 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 ARMC7Q9H6L4 198 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 GID8Q9NWU2 228 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 ANGPT4Q9Y264 503 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 A0A0J9YW62 118 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 DNAJA2O60884 412 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 TP53P04637 393 aaPredicted RBP13.24□□□□□ -0.29
USB1-203ENST00000539737 UQCRBP14927 111 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 SLC6A2P23975 617 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 ADH6P28332 368 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 AGTR1P30556 359 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 CARD18P57730 90 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 MTPNP58546 118 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 CDK6Q00534 326 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 TAB1Q15750 504 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 PGGHGQ32M88 737 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 RPS26P11Q5JNZ5 115 aaPredicted RBP13.24□□□□□ -0.29
USB1-203ENST00000539737 RNF220Q5VTB9 566 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 REEP3Q6NUK4 255 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 SEZ6L2Q6UXD5 910 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 HMGN2P46Q86SG4 172 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 MTDHQ86UE4 582 aaKnown RBP13.24□□□□□ -0.29
USB1-203ENST00000539737 KRT73Q86Y46 540 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 ZNF440Q8IYI8 595 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 C11orf65Q8NCR3 313 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 OR8J3Q8NGG0 315 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 OR52P1PQ8NH57 321 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 NFKBIDQ8NI38 313 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 POC1BQ8TC44 478 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 ABHD3Q8WU67 409 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 SMAP2Q8WU79 429 aaPredicted RBP13.24□□□□□ -0.29
USB1-203ENST00000539737 TMEM234Q8WY98 164 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 ST8SIA1Q92185 356 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 OSTF1Q92882 214 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 MAL2Q969L2 176 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 ZG16BQ96DA0 208 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 MRGPRX4Q96LA9 322 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 KLHL15Q96M94 604 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 SPATA9Q9BWV2 254 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 SRXN1Q9BYN0 137 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 ZNF443Q9Y2A4 671 aaPredicted RBP13.24□□□□□ -0.29
USB1-203ENST00000539737 IFT52Q9Y366 437 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 RNF115Q9Y4L5 304 aa13.24□□□□□ -0.29
USB1-203ENST00000539737 IGHV3-15A0A0B4J1V0 119 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 LOC100653049A0A140TA62 436 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 FXYD1O00168 92 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 ETV2O00321 342 aaPredicted RBP13.23□□□□□ -0.29
USB1-203ENST00000539737 SSX4O60224 188 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 GCM2O75603 506 aaPredicted RBP13.23□□□□□ -0.29
USB1-203ENST00000539737 KRT34O76011 436 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 CD8AP01732 235 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 C8BP07358 591 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 ETS2P15036 469 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 PPP3CBP16298 524 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 PRKCAP17252 672 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 RBBP4Q09028 425 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 SELENBP1Q13228 472 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 SCARB2Q14108 478 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 QPRTQ15274 297 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 SLC25A53Q5H9E4 307 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 NCMAPQ5T1S8 102 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 MRPL2Q5T653 305 aaKnown RBP13.23□□□□□ -0.29
USB1-203ENST00000539737 PODNL1Q6PEZ8 512 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 BEND4Q6ZU67 534 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 SERPINA11Q86U17 422 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 SLC30A8Q8IWU4 369 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 LILRA2Q8N149 483 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 ARIH2OSQ8N7S6 290 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 HIPK4Q8NE63 616 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 CPNE4Q96A23 557 aaPredicted RBP13.23□□□□□ -0.29
USB1-203ENST00000539737 LRRC58Q96CX6 371 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 SPATA5L1Q9BVQ7 753 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 CCDC106Q9BWC9 280 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 KAT8Q9H7Z6 458 aaKnown RBP13.23□□□□□ -0.29
USB1-203ENST00000539737 FAM53CQ9NYF3 392 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 ZNF232Q9UNY5 417 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 ARL2BPQ9Y2Y0 163 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 PLCE1Q9P212 2302 aa13.23□□□□□ -0.29
USB1-203ENST00000539737 YLPM1P49750 1951 aaKnown RBP13.22□□□□□ -0.29
USB1-203ENST00000539737 CDHR4A6H8M9 788 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 DPRXA6NFQ7 191 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 CLDN24A6NM45 220 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 ADAMDEC1O15204 470 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 PGM3O95394 542 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 COX4I1P13073 169 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 PSMA4P25789 261 aaKnown RBP13.22□□□□□ -0.29
USB1-203ENST00000539737 SLC7A1P30825 629 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 SFTPDP35247 375 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 IDUAP35475 653 aa13.22□□□□□ -0.29
USB1-203ENST00000539737 BSPH1Q075Z2 132 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms