RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 NID1P14543 1247 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 DCTDP32321 178 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 SIRPAP78324 504 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 RPE65Q16518 533 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 HSD17B12Q53GQ0 312 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 EIPR1Q53HC9 387 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 PRSS41Q7RTY9 318 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 PRSS42Q7Z5A4 293 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 COX18Q8N8Q8 333 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 ZBTB44Q8NCP5 570 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 MOSPD2Q8NHP6 518 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 ZNF350Q9GZX5 532 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 MCCC2Q9HCC0 563 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 GDE1Q9NZC3 331 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 FLRT3Q9NZU0 649 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 PIPOXQ9P0Z9 390 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 NPTNQ9Y639 398 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 TBC1D3EA0A087X179 549 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 TRAV1-2A0A0B4J238 106 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 C4orf47A7E2U8 309 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 PTP4A3O75365 173 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 SIX6O95475 246 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 CD53P19397 219 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 MAT2AP31153 395 aaKnown RBP18.67■□□□□ 0.58
TMEM260-203ENST00000539559 ALKAL2Q6UX46 152 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 TMPRSS11FQ6ZWK6 438 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 CMIPQ8IY22 773 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 TOR1AIP2Q8NFQ8 470 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 ZPLD1Q8TCW7 415 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 WBP1Q96G27 269 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 ARPC5LQ9BPX5 153 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 SARGQ9BW04 601 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 TEX101Q9BY14 249 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 LMAN2LQ9H0V9 348 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 C1QTNF3-AMACRE9PGA6 284 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 TRIM77I1YAP6 450 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 STX11O75558 287 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 ATP1B1P05026 303 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 KIAA1024LP59773 190 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 UBE2MP61081 183 aaKnown RBP18.66■□□□□ 0.58
TMEM260-203ENST00000539559 DYRK1AQ13627 763 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 LINC00303Q3SY05 128 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 GPAT4Q86UL3 456 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 GRAMD2AQ8IUY3 354 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 PCDHGA5Q9Y5G8 931 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 RNF215Q9Y6U7 377 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 A0A1B0GVT2 93 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 A0A1W2PP55 124 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 UCHL1P09936 223 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 CMPK1P30085 196 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 GBX2P52951 348 aaPredicted RBP18.66■□□□□ 0.58
TMEM260-203ENST00000539559 TNFRSF17Q02223 184 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 UBE2NLQ5JXB2 153 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 SLITRK4Q8IW52 837 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 COQ8AQ8NI60 647 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 NOX3Q9HBY0 568 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 C12orf4Q9NQ89 552 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 DZANK1Q9NVP4 752 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 C2orf42Q9NWW7 574 aa18.66■□□□□ 0.58
TMEM260-203ENST00000539559 ALPK2Q86TB3 2170 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 ARL6IP5O75915 188 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 HOXD4P09016 255 aaPredicted RBP18.65■□□□□ 0.58
TMEM260-203ENST00000539559 SRMP19623 302 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 IKZF1Q13422 519 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 TUSC1Q2TAM9 212 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 SEZ6L2Q6UXD5 910 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 ADGRG3Q86Y34 549 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 RNF113BQ8IZP6 322 aaKnown RBP18.65■□□□□ 0.58
TMEM260-203ENST00000539559 TEX19Q8NA77 164 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 TMEM52Q8NDY8 209 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 TSPAN10Q9H1Z9 355 aaPredicted RBP18.65■□□□□ 0.58
TMEM260-203ENST00000539559 NRIP3Q9NQ35 241 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 OBP2AQ9NY56 170 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 MRPS2Q9Y399 296 aaKnown RBP18.65■□□□□ 0.58
TMEM260-203ENST00000539559 IER3IP1Q9Y5U9 82 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 KCNMB2Q9Y691 235 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 CACNA1CQ13936 2221 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 OGG1O15527 345 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 GSTZ1O43708 216 aaPredicted RBP18.65■□□□□ 0.58
TMEM260-203ENST00000539559 DBIP07108 87 aaKnown RBP18.65■□□□□ 0.58
TMEM260-203ENST00000539559 TMIGD3P0DMS9 266 aaPredicted RBP18.65■□□□□ 0.58
TMEM260-203ENST00000539559 GABRA3P34903 492 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 HTR4Q13639 388 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 FHL1Q13642 323 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 PDGFRLQ15198 375 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 AGBL4Q5VU57 503 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 ZNF425Q6IV72 752 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 TMEM81Q6P7N7 255 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 C3P1Q6ZMU1 363 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 UXS1Q8NBZ7 420 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 OR6K6Q8NGW6 343 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 OR1F2PQ96R84 312 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 ACTR6Q9GZN1 396 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 IGFLR1Q9H665 355 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 LIN7BQ9HAP6 207 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 TRPV4Q9HBA0 871 aa18.65■□□□□ 0.58
TMEM260-203ENST00000539559 LYARQ9NX58 379 aaKnown RBP18.65■□□□□ 0.58
TMEM260-203ENST00000539559 A0A1B0GWA3 101 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 L7N2F9 121 aa18.64■□□□□ 0.57
TMEM260-203ENST00000539559 CEACAM5P06731 702 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms