RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PAMR1Q6UXH9 720 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 GKN2Q86XP6 184 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 SLC35F2Q8IXU6 374 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 SLC43A2Q8N370 569 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 ZSCAN1Q8NBB4 408 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 OR6K6Q8NGW6 343 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 SNX33Q8WV41 574 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 KLHL21Q9UJP4 597 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 GNG8Q9UK08 70 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 NOX1Q9Y5S8 564 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 OR6C68A6NDL8 312 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 C4orf47A7E2U8 309 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 OIP5O43482 229 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 SELENOFO60613 162 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 CD38P28907 300 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 TALDO1P37837 337 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 MRPS15P82914 257 aaKnown RBP22.79■■□□□ 1.24
RAB40C-204ENST00000538492 CD83Q01151 205 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 KLHL26Q53HC5 615 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 NPEPL1Q8NDH3 523 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 THAP4Q8WY91 577 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 PDE7BQ9NP56 450 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 CLEC4AQ9UMR7 237 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 ZNF337Q9Y3M9 751 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 CENPXA8MT69 81 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 BLOC1S5-TXNDC5H3BN57 136 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 LANCL1O43813 399 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 OR2T7P0C7T2 308 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 HPGDP15428 266 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 ZSWIM7Q19AV6 140 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 CBLN3Q6UW01 205 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 DPY19L2P2Q6ZN68 376 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 TPRA1Q86W33 373 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 OR2T27Q8NH04 317 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 MOSPD2Q8NHP6 518 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 TRMT10AQ8TBZ6 339 aaKnown RBP22.79■■□□□ 1.24
RAB40C-204ENST00000538492 UPRTQ96BW1 309 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 ZNF285Q96NJ3 590 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 LMAN1LQ9HAT1 526 aa22.79■■□□□ 1.24
RAB40C-204ENST00000538492 SDK1Q7Z5N4 2213 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 FAM171A2A8MVW0 826 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 IGFBP4P22692 258 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 BCL2A1Q16548 175 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.78■■□□□ 1.24
RAB40C-204ENST00000538492 ASB18Q6ZVZ8 466 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 C10orf53Q8N6V4 93 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 PHOSPHO1Q8TCT1 267 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 ZNF578Q96N58 590 aaPredicted RBP22.78■■□□□ 1.24
RAB40C-204ENST00000538492 UBL7Q96S82 380 aaPredicted RBP22.78■■□□□ 1.24
RAB40C-204ENST00000538492 OR2B2Q9GZK3 357 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 COPS3Q9UNS2 423 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 IGKV1D-42A0A075B6H8 117 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 PPM1BO75688 479 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 OR7A10O76100 309 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 FAM157BP0CG42 384 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 TFPIP10646 304 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 GRPRP30550 384 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 OR1D4P47884 311 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 GDI2P50395 445 aaKnown RBP22.78■■□□□ 1.24
RAB40C-204ENST00000538492 SF3A2Q15428 464 aaKnown RBP22.78■■□□□ 1.24
RAB40C-204ENST00000538492 MS4A15Q8N5U1 240 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 POMGNT2Q8NAT1 580 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 KCTD12Q96CX2 325 aaKnown RBP22.78■■□□□ 1.24
RAB40C-204ENST00000538492 ZC3HAV1LQ96H79 300 aaKnown RBP22.78■■□□□ 1.24
RAB40C-204ENST00000538492 ACOXLQ9NUZ1 547 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 PRODH2Q9UF12 536 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 ITGB1BP2Q9UKP3 347 aa22.78■■□□□ 1.24
RAB40C-204ENST00000538492 ELOA3DA6NLF2 546 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-204ENST00000538492 TRAPPC2P0DI81 140 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 TRAPPC2BP0DI82 140 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 RAB3BP20337 219 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 ALAS2P22557 587 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 NUDT1P36639 197 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 PSMB10P40306 273 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 ELOA3BQ3SY89 546 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 TTLL10Q6ZVT0 673 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 DUSP18Q8NEJ0 188 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 ELOA3Q8NG57 546 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 PTPMT1Q8WUK0 201 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-204ENST00000538492 HSPA12BQ96MM6 686 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-204ENST00000538492 NRIP3Q9NQ35 241 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 A0A0B4J203 849 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 LILRA5A6NI73 299 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 PSMD9O00233 223 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 GMFGO60234 142 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 SPI1P17947 270 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 GBX2P52951 348 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-204ENST00000538492 ACTA2P62736 377 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 ACTG2P63267 376 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 CDK5R1Q15078 307 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 COL13A1Q5TAT6 717 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-204ENST00000538492 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-204ENST00000538492 SMIM19Q96E16 107 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 PDCD1LG2Q9BQ51 273 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 OR8D2Q9GZM6 311 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 BOLA1Q9Y3E2 137 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 ALG5Q9Y673 324 aa22.77■■□□□ 1.24
RAB40C-204ENST00000538492 EML5Q05BV3 1969 aa22.76■■□□□ 1.23
RAB40C-204ENST00000538492 TCEA1P23193 301 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms