RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 RAB9BQ9NP90 201 aa4.96□□□□□ -1.61
LRP6-203ENST00000538239 KLF13Q9Y2Y9 288 aaPredicted RBP4.96□□□□□ -1.61
LRP6-203ENST00000538239 FER1L6Q2WGJ9 1857 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 IGHV1OR15-9A0A0B4J2B8 117 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 M0R1B8 84 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 OR2J2O76002 312 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 KNG1P01042 644 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 EIF1P41567 113 aaKnown RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 COL28A1Q2UY09 1125 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 PGGHGQ32M88 737 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 GPR139Q6DWJ6 353 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 PGM2L1Q6PCE3 622 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 ZNF322Q6U7Q0 402 aaPredicted RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 ZNF813Q6ZN06 617 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 DPY19L4Q7Z388 723 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 WFDC8Q8IUA0 241 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 CA13Q8N1Q1 262 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 LRRC20Q8TCA0 184 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 TNFRSF13CQ96RJ3 184 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 TEX101Q9BY14 249 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 ALG5Q9Y673 324 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 MYO18AQ92614 2054 aaKnown RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 IGHV3-15A0A0B4J1V0 119 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 ARNTLO00327 626 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 UBFD1O14562 309 aaKnown RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 TNFSF11O14788 317 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 SEC61A1P61619 476 aaKnown RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 LEXMQ3ZCV2 418 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 CBLL1Q75N03 491 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 TSPYL5Q86VY4 417 aaPredicted RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 LSMEM2Q8N112 164 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 CADM4Q8NFZ8 388 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 OR8J2Q8NGG1 315 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 APH1AQ96BI3 265 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 ISOC1Q96CN7 298 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 ELP4Q96EB1 424 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 TXNDC15Q96J42 360 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 TMEM68Q96MH6 324 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 KCNN3Q9UGI6 736 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 HRO43593 1189 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 PIAS2O75928 621 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 ZNF182P17025 639 aaPredicted RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 ATP1B3P54709 279 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 ZNF684Q5T5D7 378 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 FAM199XQ6PEV8 388 aaPredicted RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 Q8N402 240 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 ZNF808Q8N4W9 903 aaPredicted RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 BCORP1Q8N888 145 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 ASCC1Q8N9N2 400 aaKnown RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 ZPBPQ9BS86 351 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 EVA1AQ9H8M9 152 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 LY75O60449 1722 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 QSER1Q2KHR3 1735 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 A8MV72 311 aaPredicted RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 CENPBD1B2RD01 187 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 ABHD16AO95870 558 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 AMY2AP04746 511 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 EVI2BP34910 448 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 RAB12Q6IQ22 244 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 TMEM205Q6UW68 189 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 UGT2A3Q6UWM9 527 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 MKXQ8IYA7 352 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 OR5AS1Q8N127 324 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 LILRA2Q8N149 483 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 KDM8Q8N371 416 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 MS4A15Q8N5U1 240 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 RRNAD1Q96FB5 475 aaKnown RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 IP6K3Q96PC2 410 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 OR52A5Q9H2C5 316 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 DAPP1Q9UN19 280 aa4.96□□□□□ -1.62
LRP6-203ENST00000538239 MAGED1Q9Y5V3 778 aaPredicted RBP4.96□□□□□ -1.62
LRP6-203ENST00000538239 EIF1BO60739 113 aaKnown RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 IL2RAP01589 272 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 FCGR2AP12318 317 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ARSBP15848 533 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TCTN1Q2MV58 587 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 MFSD12Q6NUT3 480 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TMEM150AQ86TG1 271 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 VASH2Q86V25 355 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 BPHLQ86WA6 291 aaPredicted RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 EXD3Q8N9H8 876 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 B3GNT7Q8NFL0 401 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TMEM163Q8TC26 289 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 CPPED1Q9BRF8 314 aaPredicted RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 C1orf198Q9H425 327 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TMEM45AQ9NWC5 275 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PLA2G3Q9NZ20 509 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PDE4DIPQ5VU43 2346 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 A0A1B0GWA3 101 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 OR6C76A6NM76 312 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 LMO7DNF2Z398 122 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GASTP01350 101 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GRPP07492 148 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 CHMP24386 653 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ETV5P41161 510 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GPR3P46089 330 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 RPL34P49207 117 aaKnown RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 P2RX1P51575 399 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 WNT4P56705 351 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SF3A2Q15428 464 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms