RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 GUSBP1Q15486 140 aa16.03■□□□□ 0.16
CCDC61-201ENST00000536603 FBXL19-AS1Q494R0 122 aa16.03■□□□□ 0.16
CCDC61-201ENST00000536603 INTS11Q5TA45 600 aaKnown RBP16.03■□□□□ 0.16
CCDC61-201ENST00000536603 PATL1Q86TB9 770 aaKnown RBP16.03■□□□□ 0.16
CCDC61-201ENST00000536603 BHLHE22Q8NFJ8 381 aaPredicted RBP16.03■□□□□ 0.16
CCDC61-201ENST00000536603 RBM24Q9BX46 236 aaKnown RBP16.03■□□□□ 0.16
CCDC61-201ENST00000536603 GLRX2Q9NS18 164 aa16.03■□□□□ 0.16
CCDC61-201ENST00000536603 SLC13A4Q9UKG4 626 aa16.03■□□□□ 0.16
CCDC61-201ENST00000536603 A8MXE2 369 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 ZNF208O43345 1280 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 SS18L1O75177 396 aaPredicted RBP16.02■□□□□ 0.16
CCDC61-201ENST00000536603 PRKD3O94806 890 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 FOSL1P15407 271 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 MAP2K6P52564 334 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 CTBP2P56545 445 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 CSNK2A1P68400 391 aaPredicted RBP16.02■□□□□ 0.16
CCDC61-201ENST00000536603 DUSP7Q16829 419 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 C16orf89Q6UX73 402 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 RNF128Q8TEB7 428 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 ABHD3Q8WU67 409 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 DDIT4LQ96D03 193 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 CDRT15Q96T59 188 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 WFDC6Q9BQY6 131 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 PRR14Q9BWN1 585 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 C1orf21Q9H246 121 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 KLHL28Q9NXS3 571 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 FOXD3Q9UJU5 478 aaPredicted RBP16.02■□□□□ 0.16
CCDC61-201ENST00000536603 EMC9Q9Y3B6 208 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 HDGFL3Q9Y3E1 203 aa16.02■□□□□ 0.16
CCDC61-201ENST00000536603 NIPBLQ6KC79 2804 aaeCLIP16.02■□□□□ 0.15
CCDC61-201ENST00000536603 ZC3H12DA2A288 527 aaKnown RBP16.01■□□□□ 0.15
CCDC61-201ENST00000536603 MSTNO14793 375 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 CGAP01215 116 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 GSK3BP49841 420 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 RGS8P57771 180 aaPredicted RBP16.01■□□□□ 0.15
CCDC61-201ENST00000536603 ADAM8P78325 824 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 LIPEQ05469 1076 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 BNIP2Q12982 314 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 CEACAM7Q14002 265 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 KEAP1Q14145 624 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 RNPS1Q15287 305 aaKnown RBP16.01■□□□□ 0.15
CCDC61-201ENST00000536603 ZSCAN26Q16670 478 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 ERICH5Q6P6B1 374 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 ARPINQ7Z6K5 226 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 RNF148Q8N7C7 305 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 SLC26A7Q8TE54 656 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 FAM222BQ8WU58 562 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 C3orf49Q96BT1 292 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 TAMM41Q96BW9 452 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 CLPTM1LQ96KA5 538 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 BTBD10Q9BSF8 475 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 OPN3Q9H1Y3 402 aaPredicted RBP16.01■□□□□ 0.15
CCDC61-201ENST00000536603 SPAG4Q9NPE6 437 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 RPS6KB2Q9UBS0 482 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 CD300AQ9UGN4 299 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 PROCRQ9UNN8 238 aa16.01■□□□□ 0.15
CCDC61-201ENST00000536603 FAM220BPB1ANY3 271 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 SMAD9O15198 467 aaKnown RBP16■□□□□ 0.15
CCDC61-201ENST00000536603 ATP5HO75947 161 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 PMS2P2O95744 297 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 LGI1O95970 557 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 RAF1P04049 648 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 FESP07332 822 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 HTR2AP28223 471 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 KCNJ5P48544 419 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 OR2B6P58173 313 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 VEZF1Q14119 521 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 CCDC80Q76M96 950 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 TUSC5Q8IXB3 177 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 SLC43A2Q8N370 569 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 LSMEM1Q8N8F7 131 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 ZNF610Q8N9Z0 462 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 FAM156AQ8NDB6 213 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 OR2T12Q8NG77 320 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 GPR32P1Q8NGA4 272 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 OR52E4Q8NGH9 312 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 OR6K3Q8NGY3 331 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 CADM1Q9BY67 442 aaKnown RBP16■□□□□ 0.15
CCDC61-201ENST00000536603 TRIM2Q9C040 744 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 LRMDAQ9H2I8 198 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 GALNT8Q9NY28 637 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 ADA2Q9NZK5 511 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 TRAPPC4Q9Y296 219 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 AP3M1Q9Y2T2 418 aa16■□□□□ 0.15
CCDC61-201ENST00000536603 MAP1AP78559 2803 aaPredicted RBP16■□□□□ 0.15
CCDC61-201ENST00000536603 GYG2O15488 501 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 GSC2O15499 205 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 TPST2O60704 377 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 CYTIPO60759 359 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 C8BP07358 591 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 CD8BP10966 210 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 IMPDH2P12268 514 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 CD247P20963 164 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 MSX2P35548 267 aaPredicted RBP15.99■□□□□ 0.15
CCDC61-201ENST00000536603 RASGEF1BQ0VAM2 473 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 TMEM201Q5SNT2 666 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 ZNF474Q6S9Z5 364 aaPredicted RBP15.99■□□□□ 0.15
CCDC61-201ENST00000536603 PAMR1Q6UXH9 720 aa15.99■□□□□ 0.15
CCDC61-201ENST00000536603 Q71RC1 249 aaPredicted RBP15.99■□□□□ 0.15
CCDC61-201ENST00000536603 ASRGL1Q7L266 308 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms