RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 MRGBPQ9NV56 204 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 VAPAQ9P0L0 249 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 OSGIN1Q9UJX0 560 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 ZNF232Q9UNY5 417 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 CORO2BQ9UQ03 480 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 COL6A5A8TX70 2615 aa11.04□□□□□ -0.64
PRKDC-207ENST00000536483 PRR14LQ5THK1 2151 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 TMED7-TICAM2A0A0A6YYA0 188 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 SULT2B1O00204 365 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 AP3D1O14617 1153 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 FZD7O75084 574 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 PGM3O95394 542 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 NUDT7P0C024 238 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 ARAFP10398 606 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 UQCRBP14927 111 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 PAX1P15863 534 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 DRD4P21917 467 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 RYKP34925 604 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 OR3A2P47893 321 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 ATP5J2P56134 94 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 LARS2Q15031 903 aaKnown RBP11.03□□□□□ -0.64
PRKDC-207ENST00000536483 P2RY6Q15077 328 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 ADRM1Q16186 407 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 RUNDC3AQ59EK9 446 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 TMEM201Q5SNT2 666 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 ZNF836Q6ZNA1 936 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 NUFIP2Q7Z417 695 aaKnown RBP11.03□□□□□ -0.64
PRKDC-207ENST00000536483 VRK2Q86Y07 508 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 WFDC8Q8IUA0 241 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 CLIP4Q8N3C7 705 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 PLPPR2Q96GM1 343 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 ARL5BQ96KC2 179 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 OR5B2Q96R09 309 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 RSPO3Q9BXY4 272 aaPredicted RBP11.03□□□□□ -0.64
PRKDC-207ENST00000536483 CXorf56Q9H5V9 222 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 PIF1Q9H611 641 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 ARMC7Q9H6L4 198 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 ZNF701Q9NV72 531 aaPredicted RBP11.03□□□□□ -0.64
PRKDC-207ENST00000536483 RLIMQ9NVW2 624 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 TMEM181Q9P2C4 612 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 ZNF443Q9Y2A4 671 aaPredicted RBP11.03□□□□□ -0.64
PRKDC-207ENST00000536483 TMED7Q9Y3B3 224 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 ATRQ13535 2644 aa11.03□□□□□ -0.64
PRKDC-207ENST00000536483 FBN1P35555 2871 aaKnown RBP11.02□□□□□ -0.64
PRKDC-207ENST00000536483 SONP18583 2426 aaKnown RBP11.02□□□□□ -0.65
PRKDC-207ENST00000536483 ZNF716A6NP11 495 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 NR5A2O00482 541 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 EIF1BO60739 113 aaKnown RBP11.02□□□□□ -0.65
PRKDC-207ENST00000536483 NPIPB7O75200 414 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 TACR3P29371 465 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 PRKAR1BP31321 381 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 NR1H2P55055 460 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 RASGEF1BQ0VAM2 473 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 CAPRIN1Q14444 709 aaKnown RBP11.02□□□□□ -0.65
PRKDC-207ENST00000536483 WBP2NLQ6ICG8 309 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 ALKBH2Q6NS38 261 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 REEP3Q6NUK4 255 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 DHRS4L2Q6PKH6 230 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 CXXC5Q7LFL8 322 aaKnown RBP11.02□□□□□ -0.65
PRKDC-207ENST00000536483 PIGWQ7Z7B1 504 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 HMGN2P46Q86SG4 172 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 C10orf111Q8N326 155 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 ZNF611Q8N823 705 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 LSMEM1Q8N8F7 131 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 ATP6V1C2Q8NEY4 427 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 CPPED1Q9BRF8 314 aaPredicted RBP11.02□□□□□ -0.65
PRKDC-207ENST00000536483 ACTR6Q9GZN1 396 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 EVA1AQ9H8M9 152 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 C12orf10Q9HB07 376 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 NPHS2Q9NP85 383 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 LEF1Q9UJU2 399 aaPredicted RBP11.02□□□□□ -0.65
PRKDC-207ENST00000536483 NDUFAF1Q9Y375 327 aa11.02□□□□□ -0.65
PRKDC-207ENST00000536483 ZNF814B7Z6K7 855 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 GPR171O14626 319 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 HS3ST1O14792 307 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 FESP07332 822 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 NCF2P19878 526 aaPredicted RBP11.01□□□□□ -0.65
PRKDC-207ENST00000536483 SEC24CP53992 1094 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 CDK6Q00534 326 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 RBBP4Q09028 425 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 TNK1Q13470 666 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 COQ5Q5HYK3 327 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 ZNF311Q5JNZ3 666 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 RPS26P11Q5JNZ5 115 aaPredicted RBP11.01□□□□□ -0.65
PRKDC-207ENST00000536483 SFRP5Q5T4F7 317 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 GCNT6Q5T4J0 391 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 C6orf89Q6UWU4 347 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 Q6ZT83 130 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 SSX8Q7RTT4 187 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 NET1Q7Z628 596 aaPredicted RBP11.01□□□□□ -0.65
PRKDC-207ENST00000536483 GALNT5Q7Z7M9 940 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 RETREG3Q86VR2 466 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 CCDC197Q8NCU1 140 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 BHLHE22Q8NFJ8 381 aaPredicted RBP11.01□□□□□ -0.65
PRKDC-207ENST00000536483 STEAP2Q8NFT2 490 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 PIGXQ8TBF5 258 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 AKAP1Q92667 903 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRKDC-207ENST00000536483 MAL2Q969L2 176 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 DDIT4LQ96D03 193 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 ZHX1-C8orf76Q96EF9 292 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms