RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SHISA9B4DS77 424 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 ZNF587BE7ETH6 402 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 HMGN4O00479 90 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 FAAHO00519 579 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 HDAC3O15379 428 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 AKAP8O43823 692 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 SLC22A3O75751 556 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 CRYAAP02489 173 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 CREB1P16220 341 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 ARRB2P32121 409 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 STX1BP61266 288 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 IL1RL1Q01638 556 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 OR7A5Q15622 319 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 MAPK14Q16539 360 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 C6orf10Q5SRN2 563 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 C9orf135Q5VTT2 229 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 CXXC5Q7LFL8 322 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 HMGN2P46Q86SG4 172 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 ADGRG3Q86Y34 549 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 CCDC103Q8IW40 242 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 LILRB1Q8NHL6 650 aaPredicted RBP11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 PNPT1Q8TCS8 783 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 ITCHQ96J02 903 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 ARL5BQ96KC2 179 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 MUS81Q96NY9 551 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 C1QTNF6Q9BXI9 259 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 BEX2Q9BXY8 128 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 AMBRA1Q9C0C7 1298 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 AIG1Q9NVV5 245 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 ADPRHL2Q9NX46 363 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 KCNE5Q9UJ90 142 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 GDF2Q9UK05 429 aaPredicted RBP11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 ING1Q9UK53 422 aaPredicted RBP11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 SLC13A4Q9UKG4 626 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 CDC42EP3Q9UKI2 254 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 IFT52Q9Y366 437 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 SLC25A15Q9Y619 301 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 RAI1Q7Z5J4 1906 aaPredicted RBP11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 CENPVL1A0A0U1RR11 272 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 A0A1W2PR80 420 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 TMEM72A0PK05 275 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 A8MVM7 634 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 KIAA1324LA8MWY0 1029 aaPredicted RBP11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 AHSA1O95433 338 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 GSNP06396 782 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 KITP10721 976 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 HNF1AP20823 631 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 APOBEC3AP31941 199 aaPredicted RBP11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 DSTNP60981 165 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 NCALDP61601 193 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 PHC1P78364 1004 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 CEACAM7Q14002 265 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 GABRA6Q16445 453 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 SYPL1Q16563 259 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 MRPL2Q5T653 305 aaKnown RBP11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 PRAMEF8Q5VWM4 474 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 PRAMEF7Q5VXH5 474 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 OLIG3Q7RTU3 272 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 PRIMA1Q86XR5 153 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 ANKFN1Q8N957 763 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 OR52P1PQ8NH57 321 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 TMEM158Q8WZ71 300 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 CNOT9Q92600 299 aaKnown RBP11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 ZNF75CPQ92670 426 aaPredicted RBP11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 ZNF317Q96PQ6 595 aaPredicted RBP11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 PIMREGQ9BSJ6 248 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 MYOZ1Q9NP98 299 aaPredicted RBP11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 OSGIN1Q9UJX0 560 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 HEATR5AQ86XA9 2040 aa11.65□□□□□ -0.54
CLSTN3-205ENST00000535452 GOLGA8QA0A0J9YX86 632 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 GOLGA8OA6NCC3 632 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 GOLGA8NF8WBI6 632 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 EFNA4P52798 201 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 UFM1P61960 85 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 BST1Q10588 318 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 EPS8Q12929 822 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 CARTPTQ16568 116 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 PDCD4Q53EL6 469 aaKnown RBP11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 CYB5R2Q6BCY4 276 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 SLC46A3Q7Z3Q1 461 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 ATG4DQ86TL0 474 aaPredicted RBP11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 ZNF540Q8NDQ6 660 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 OR52E4Q8NGH9 312 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 PROX1Q92786 737 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 TMEM45BQ96B21 275 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 TNFRSF13CQ96RJ3 184 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 SHARPINQ9H0F6 387 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 SLC17A5Q9NRA2 495 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 PNPOQ9NVS9 261 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 NPAP1Q9NZP6 1156 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 RASD1Q9Y272 281 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 FLVCR1Q9Y5Y0 555 aa11.64□□□□□ -0.55
CLSTN3-205ENST00000535452 A0A0G2JPF8 293 aa11.63□□□□□ -0.55
CLSTN3-205ENST00000535452 ELOA3DA6NLF2 546 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-205ENST00000535452 CLDN24A6NM45 220 aa11.63□□□□□ -0.55
CLSTN3-205ENST00000535452 HNRNPCL2B2RXH8 293 aa11.63□□□□□ -0.55
CLSTN3-205ENST00000535452 HNRNPCL3B7ZW38 293 aa11.63□□□□□ -0.55
CLSTN3-205ENST00000535452 E7EQL1 145 aa11.63□□□□□ -0.55
CLSTN3-205ENST00000535452 H7C417 338 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms