RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 VPS37AQ8NEZ2 397 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 TMEM45BQ96B21 275 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 MSI2Q96DH6 328 aaKnown RBP12.13□□□□□ -0.47
CCDC84-208ENST00000534656 NEURL3Q96EH8 262 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 BOD1Q96IK1 185 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 ZIM3Q96PE6 472 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 SORCS2Q96PQ0 1159 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 PIMREGQ9BSJ6 248 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 PRR14Q9BWN1 585 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 DPY30Q9C005 99 aa12.13□□□□□ -0.47
CCDC84-208ENST00000534656 SVEP1Q4LDE5 3571 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 AP3D1O14617 1153 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 BPGMP07738 259 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 NUDT17P0C025 328 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 TACR3P29371 465 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 SLC1A3P43003 542 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 PAQR6Q6TCH4 344 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 KLHL24Q6TFL4 600 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 IL17RELQ6ZVW7 336 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 CMIPQ8IY22 773 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 ZIC4Q8N9L1 334 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 POMGNT2Q8NAT1 580 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 TESCQ96BS2 214 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 AKTIPQ9H8T0 292 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 CHODLQ9H9P2 273 aa12.12□□□□□ -0.47
CCDC84-208ENST00000534656 MARCOQ9UEW3 520 aaPredicted RBP12.12□□□□□ -0.47
CCDC84-208ENST00000534656 ANK2Q01484 3957 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 IGHV1-18A0A0C4DH31 117 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 LOC390937A0A1W2PQ73 354 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 ZC3H12DA2A288 527 aaKnown RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 HMGN4O00479 90 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 FAAHO00519 579 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 KLF11O14901 512 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 APEHP13798 732 aaKnown RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 CDH2P19022 906 aaPredicted RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 HNF1AP20823 631 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 CHI3L1P36222 383 aaPredicted RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 SNRPD2P62316 118 aaKnown RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 HPCAP84074 193 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 SRSF2Q01130 221 aaKnown RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 CASP8Q14790 479 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 PDCD2Q16342 344 aaPredicted RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 SYPL1Q16563 259 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 HIKESHIQ53FT3 197 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 OTUD3Q5T2D3 398 aaPredicted RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 AAED1Q7RTV5 226 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 ABHD12BQ7Z5M8 362 aaPredicted RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 LSRQ86X29 649 aaPredicted RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 PPP1R36Q96LQ0 422 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 FOXN4Q96NZ1 517 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 ZNF385AQ96PM9 386 aaKnown RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 TRNT1Q96Q11 434 aaKnown RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 SLC35A5Q9BS91 424 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 ADAM19Q9H013 955 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 SLC38A1Q9H2H9 487 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 PIF1Q9H611 641 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 MYOZ1Q9NP98 299 aaPredicted RBP12.11□□□□□ -0.47
CCDC84-208ENST00000534656 OBP2BQ9NPH6 170 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 LGALS13Q9UHV8 139 aa12.11□□□□□ -0.47
CCDC84-208ENST00000534656 IGHV4-61A0A0C4DH41 118 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 AGAP5A6NIR3 686 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 ITM2AO43736 263 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 C1QCP02747 245 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 GPIP06744 558 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 PAX7P23759 505 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 SERPINF1P36955 418 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 CEACAM7Q14002 265 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 CARTPTQ16568 116 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 NUDCD3Q8IVD9 361 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 TMEM99Q8N816 258 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 ANKFN1Q8N957 763 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 OR9K2Q8NGE7 335 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 C3orf49Q96BT1 292 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 AURKBQ96GD4 344 aaPredicted RBP12.1□□□□□ -0.47
CCDC84-208ENST00000534656 SLC38A2Q96QD8 506 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 VRK1Q99986 396 aaPredicted RBP12.1□□□□□ -0.47
CCDC84-208ENST00000534656 KCNS3Q9BQ31 491 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 KATNB1Q9BVA0 655 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 MTHFD2LQ9H903 347 aaPredicted RBP12.1□□□□□ -0.47
CCDC84-208ENST00000534656 TMEM45AQ9NWC5 275 aa12.1□□□□□ -0.47
CCDC84-208ENST00000534656 PLCE1Q9P212 2302 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 LIPT2A6NK58 231 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 AQP7P3A6NL99 342 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 B9A039 149 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 HAX1O00165 279 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 AKR7A3O95154 331 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 TGFAP01135 160 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 CRYAAP02489 173 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 CHRM4P08173 479 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 UQCRBP14927 111 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 CREB1P16220 341 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 IL7RP16871 459 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 ZNF23P17027 643 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 RPS4Y1P22090 263 aaKnown RBP12.09□□□□□ -0.47
CCDC84-208ENST00000534656 ETV4P43268 484 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 EPS8Q12929 822 aa12.09□□□□□ -0.47
CCDC84-208ENST00000534656 GNA13Q14344 377 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms