RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 C5orf46Q6UWT4 87 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 DNAJC14Q6Y2X3 702 aaPredicted RBP8.51□□□□□ -1.05
CHD7-208ENST00000528280 VRK2Q86Y07 508 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 WFDC8Q8IUA0 241 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 FUNDC1Q8IVP5 155 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 UBE2J2Q8N2K1 259 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 STK35Q8TDR2 534 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 S100PBPQ96BU1 408 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 PLPPR2Q96GM1 343 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 ARL5BQ96KC2 179 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 EBF4Q9BQW3 602 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 FAM107BQ9H098 131 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 GSX1Q9H4S2 264 aaPredicted RBP8.51□□□□□ -1.05
CHD7-208ENST00000528280 TMEM38AQ9H6F2 299 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 UBTD1Q9HAC8 227 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 C12orf10Q9HB07 376 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 SLC6A13Q9NSD5 602 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 RLIMQ9NVW2 624 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 ASB6Q9NWX5 421 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 RPS6KB2Q9UBS0 482 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 LEF1Q9UJU2 399 aaPredicted RBP8.51□□□□□ -1.05
CHD7-208ENST00000528280 ING1Q9UK53 422 aaPredicted RBP8.51□□□□□ -1.05
CHD7-208ENST00000528280 SLC13A4Q9UKG4 626 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 SLC9A8Q9Y2E8 581 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 NDUFAF1Q9Y375 327 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 ABCA4P78363 2273 aa8.51□□□□□ -1.05
CHD7-208ENST00000528280 FLNAP21333 2647 aaKnown RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 JMJD1CQ15652 2540 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 CIB4A0PJX0 185 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 TMEM72A0PK05 275 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 ZNF716A6NP11 495 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 FAM171A2A8MVW0 826 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 NR5A2O00482 541 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 OR2T1O43869 369 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 BCAS1O75363 584 aaPredicted RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 C1QCP02747 245 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 CD3EP07766 207 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 GKN3PP0CG01 181 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 PNMTP11086 282 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 CDK6Q00534 326 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 RBBP4Q09028 425 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 CAPRIN1Q14444 709 aaKnown RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 GCNT6Q5T4J0 391 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 KLHL17Q6TDP4 642 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 ZNF836Q6ZNA1 936 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 ZNF704Q6ZNC4 412 aaPredicted RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 C22orf34Q6ZV56 151 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 ABHD12BQ7Z5M8 362 aaPredicted RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 NET1Q7Z628 596 aaPredicted RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 HMGN2P46Q86SG4 172 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 SLC30A8Q8IWU4 369 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 CLIP4Q8N3C7 705 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 CADM2Q8N3J6 435 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 ZNF611Q8N823 705 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 LSMEM1Q8N8F7 131 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 TMEM171Q8WVE6 324 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 DNAJA4Q8WW22 397 aaPredicted RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 ZNF775Q96BV0 537 aaPredicted RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 AURKBQ96GD4 344 aaPredicted RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 ZNF300Q96RE9 604 aaPredicted RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 CCL19Q99731 98 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 SH3GL1Q99961 368 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 TMEM204Q9BSN7 226 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 TRIM2Q9C040 744 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 OR11A1Q9GZK7 315 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 CXorf56Q9H5V9 222 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 SELENONQ9NZV5 590 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 UPB1Q9UBR1 384 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.5□□□□□ -1.05
CHD7-208ENST00000528280 MGAT4BQ9UQ53 548 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 RNF115Q9Y4L5 304 aa8.5□□□□□ -1.05
CHD7-208ENST00000528280 A0A1W2PPR1 153 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 LIPT2A6NK58 231 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 CCT8L1PA6NM43 557 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 HS3ST1O14792 307 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 ANGPT2O15123 496 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 SIAH2O43255 324 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 EDF1O60869 148 aaKnown RBP8.49□□□□□ -1.05
CHD7-208ENST00000528280 ADAM11O75078 769 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 NPPAP01160 153 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 ARAFP10398 606 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 PAX1P15863 534 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 COX5AP20674 150 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 LOXP28300 417 aaPredicted RBP8.49□□□□□ -1.05
CHD7-208ENST00000528280 CEACAM7Q14002 265 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 SLC17A1Q14916 467 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 PPA1Q15181 289 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 TAB1Q15750 504 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 GTDC1Q4AE62 458 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 RUNDC3AQ59EK9 446 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 PAGE3Q5JUK9 113 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 NCMAPQ5T1S8 102 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 OTUD3Q5T2D3 398 aaPredicted RBP8.49□□□□□ -1.05
CHD7-208ENST00000528280 DHRS4L2Q6PKH6 230 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 CCDC103Q8IW40 242 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 DEPDC4Q8N2C3 294 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 DPP10Q8N608 796 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 ZNF433Q8N7K0 673 aaPredicted RBP8.49□□□□□ -1.05
CHD7-208ENST00000528280 POMGNT2Q8NAT1 580 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 MFSD8Q8NHS3 518 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms