RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 CARTPTQ16568 116 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 IQCCQ4KMZ1 466 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 FRRS1Q6ZNA5 592 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 ZCCHC23Q6ZST2 131 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 ZIC4Q8N9L1 334 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 ZNF540Q8NDQ6 660 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 OR8J2Q8NGG1 315 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 OR4A15Q8NGL6 344 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 TMEM45BQ96B21 275 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 APOPT1Q96IL0 206 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 VRK1Q99986 396 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-210ENST00000527027 OBP2BQ9NPH6 170 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 OSGIN1Q9UJX0 560 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 RAB21Q9UL25 225 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 TMED7Q9Y3B3 224 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 ARFGEF3Q5TH69 2177 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 CLDN24A6NM45 220 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 PGRP06401 933 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 ZNF23P17027 643 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 CDH2P19022 906 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-210ENST00000527027 UQCRC2P22695 453 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 ARRB2P32121 409 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 POLR2HP52434 150 aaKnown RBP14.04□□□□□ -0.16
PTPRU-210ENST00000527027 MAP2K6P52564 334 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 PLAURQ03405 335 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 FUT5Q11128 374 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 HIKESHIQ53FT3 197 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 TNFAIP8L2Q6P589 184 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-210ENST00000527027 PAQR6Q6TCH4 344 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 AAED1Q7RTV5 226 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 SLC46A3Q7Z3Q1 461 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 HMGN2P46Q86SG4 172 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 ANKS4BQ8N8V4 417 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 POMGNT2Q8NAT1 580 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 CNOT9Q92600 299 aaKnown RBP14.04□□□□□ -0.16
PTPRU-210ENST00000527027 PARD6BQ9BYG5 372 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 ASIC5Q9NY37 505 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 NOP53Q9NZM5 478 aaKnown RBP14.04□□□□□ -0.16
PTPRU-210ENST00000527027 SLC17A7Q9P2U7 560 aa14.04□□□□□ -0.16
PTPRU-210ENST00000527027 IGHV1-18A0A0C4DH31 117 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 PRSS51A0A1B0GVH4 220 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 TMEM72A0PK05 275 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 B9A039 149 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 AP3D1O14617 1153 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 SCN2BO60939 215 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 PAX7P23759 505 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 TACR3P29371 465 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 SLC1A3P43003 542 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 SMU1Q2TAY7 513 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 CR1LQ2VPA4 569 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 GPAT3Q53EU6 434 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 OTUD3Q5T2D3 398 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-210ENST00000527027 SAXO2Q658L1 398 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 SPATA19Q7Z5L4 167 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 ABHD12BQ7Z5M8 362 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-210ENST00000527027 CMIPQ8IY22 773 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 ZNF385AQ96PM9 386 aaKnown RBP14.03□□□□□ -0.16
PTPRU-210ENST00000527027 SLC38A2Q96QD8 506 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 KCNS3Q9BQ31 491 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 SF3B5Q9BWJ5 86 aaKnown RBP14.03□□□□□ -0.16
PTPRU-210ENST00000527027 CA10Q9NS85 328 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 ARGLU1Q9NWB6 273 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-210ENST00000527027 TMEM45AQ9NWC5 275 aa14.03□□□□□ -0.16
PTPRU-210ENST00000527027 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTPRU-210ENST00000527027 V9GYY5 206 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-210ENST00000527027 TLDC2A0PJX2 215 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 ZC3H12DA2A288 527 aaKnown RBP14.02□□□□□ -0.17
PTPRU-210ENST00000527027 PRAMEF27A3QJZ7 478 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 PDE5AO76074 875 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 CPSF4O95639 269 aaKnown RBP14.02□□□□□ -0.17
PTPRU-210ENST00000527027 CRYAAP02489 173 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 OR4A8P0C604 315 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 KHKP50053 298 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 HPCAP84074 193 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 ANXA8L1Q5VT79 327 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 ANKRD46Q86W74 232 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 RFLNBQ8N5W9 214 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 TMEM99Q8N816 258 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 VPS37AQ8NEZ2 397 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 NEURL3Q96EH8 262 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 AURKBQ96GD4 344 aaPredicted RBP14.02□□□□□ -0.17
PTPRU-210ENST00000527027 SOX7Q9BT81 388 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 KATNB1Q9BVA0 655 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 BPESC1Q9GZL8 116 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 PIF1Q9H611 641 aa14.02□□□□□ -0.17
PTPRU-210ENST00000527027 FAAHO00519 579 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 KRT33AO76009 404 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 GPIP06744 558 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 IDH3GP51553 393 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-210ENST00000527027 VSNL1P62760 191 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 CEACAM7Q14002 265 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 EFNB3Q15768 340 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 ADIPOQQ15848 244 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 TBRG1Q3YBR2 411 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 ANKRD16Q6P6B7 361 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 LSRQ86X29 649 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-210ENST00000527027 OR9K2Q8NGE7 335 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 OR1K1Q8NGR3 316 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 TCP10LQ8TDR4 215 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 ZIM3Q96PE6 472 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms