RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 CEACAM3P40198 252 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PAX9P55771 341 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 C21orf59P57076 290 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 OR2B6P58173 313 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 UBE2G2P60604 165 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ACTA2P62736 377 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ACTG2P63267 376 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ACTC1P68032 377 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ACTA1P68133 377 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 SRSF7Q16629 238 aaKnown RBP eCLIP1.12□□□□□ -2.23
KNL1-203ENST00000526913 ECSCRQ19T08 205 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 RPEL1Q2QD12 228 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 NDUFAF6Q330K2 333 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 LEMD1Q68G75 181 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 Q6ZVH6 145 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 CBLN2Q8IUK8 224 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 GVQW1Q8N7I0 195 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ZNF519Q8TB69 540 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PPP1R36Q96LQ0 422 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ZNF641Q96N77 438 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 LRRC1Q9BTT6 524 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PNNQ9H307 717 aaKnown RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 CLMPQ9H6B4 373 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 MYOZ2Q9NPC6 264 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 TEX10Q9NXF1 929 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 DHRS4-AS1Q9P1J3 65 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 RNF7Q9UBF6 113 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 GNPTGQ9UJJ9 305 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 RPH3ALQ9UNE2 315 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 RNF6Q9Y252 685 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 COX11Q9Y6N1 276 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 SH3TC1Q8TE82 1336 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 POGZQ7Z3K3 1410 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 MAST4O15021 2626 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ARHGEF11O15085 1522 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 LOC100131303A0A0U1RQF7 123 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PHF1O43189 567 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 PSTPIP1O43586 416 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 OR10H3O60404 316 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ZNF253O75346 499 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PSIP1O75475 530 aaKnown RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 GLUD1P00367 558 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PRSS2P07478 247 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 RHOXF2BP0C7M4 288 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PRSS56P0CW18 603 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 TROVE2P10155 538 aaKnown RBP eCLIP1.12□□□□□ -2.23
KNL1-203ENST00000526913 PMCHP20382 165 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 AADACP22760 399 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 FGF9P31371 208 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 ACVR1BP36896 505 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PTGDSP41222 190 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ALDH3B2P48448 385 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 GLUD2P49448 558 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 UBE2KP61086 200 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 GNB1P62873 340 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 TNNC1P63316 161 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 DHODHQ02127 395 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 SGSM1Q2NKQ1 1148 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 KIAA1644Q3SXP7 199 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PPM1LQ5SGD2 360 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ADAMTSL4-AS1Q5T5F5 129 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 C11orf87Q6NUJ2 197 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 MOB2Q70IA6 237 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 THOC6Q86W42 341 aaKnown RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 FAM89BQ8N5H3 189 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 FBXO25Q8TCJ0 367 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.12□□□□□ -2.23
KNL1-203ENST00000526913 UFD1Q92890 307 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PSMG2Q969U7 264 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PLIN2Q99541 437 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 RHOXF2Q9BQY4 288 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 RACGAP1Q9H0H5 632 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 PEF1Q9UBV8 284 aaKnown RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 ELF5Q9UKW6 265 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 PPP1R3CQ9UQK1 317 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 CA5BQ9Y2D0 317 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 YARS2Q9Y2Z4 477 aaKnown RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 TSSC4Q9Y5U2 329 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 TCF20Q9UGU0 1960 aaKnown RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 BRD4O60885 1362 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 CUBNO60494 3623 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 NACADO15069 1562 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 TMCO5BA8MYB1 307 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ZNF701M0R085 212 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 CABYRO75952 493 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ALPLP05186 524 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 DPEP1P16444 411 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 CA6P23280 308 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 STOMP27105 288 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 TIMP3P35625 211 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 MLF1P58340 268 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 CDH17Q12864 832 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 ZNF177Q13360 481 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 CYLC2Q14093 348 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 CRMP1Q14194 572 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 KCTD19Q17RG1 926 aaPredicted RBP1.12□□□□□ -2.23
KNL1-203ENST00000526913 GLIPR1L2Q4G1C9 344 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 GPR107Q5VW38 600 aa1.12□□□□□ -2.23
KNL1-203ENST00000526913 APOBEC3HQ6NTF7 200 aaKnown RBP1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms