RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 LIMK2P53671 638 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 SH3BGRP55822 239 aaPredicted RBP3.06□□□□□ -1.92
CD44-219ENST00000525685 YBEYP58557 167 aaPredicted RBP3.06□□□□□ -1.92
CD44-219ENST00000525685 DSCR10P59022 87 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 RPS14P62263 151 aaKnown RBP3.06□□□□□ -1.92
CD44-219ENST00000525685 AP1B1Q10567 949 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 PEX6Q13608 980 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 ZSCAN26Q16670 478 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 HADHQ16836 314 aaKnown RBP3.06□□□□□ -1.92
CD44-219ENST00000525685 PARP15Q460N3 678 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 BOLA3Q53S33 107 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 CMPK2Q5EBM0 449 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 TCTEX1D4Q5JR98 221 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 TEX35Q5T0J7 233 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 C9orf64Q5T6V5 341 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 NKAIN2Q5VXU1 208 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 NCBP2-AS2Q69YL0 99 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 STEAP1BQ6NZ63 245 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 REG3GQ6UW15 175 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 KIAA1328Q86T90 577 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 CDC20BQ86Y33 519 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 LRRC8AQ8IWT6 810 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 UMODL1-AS1Q8N2C9 162 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 STK40Q8N2I9 435 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 PQLC3Q8N755 202 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 CCDC112Q8NEF3 446 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 RDH11Q8TC12 318 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 RLN3Q8WXF3 142 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 RAPGEF5Q92565 580 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 RAB39BQ96DA2 213 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 MRPL53Q96EL3 112 aaKnown RBP3.06□□□□□ -1.92
CD44-219ENST00000525685 ZNF670Q9BS34 389 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 DCTN5Q9BTE1 182 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 ETNK2Q9NVF9 386 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 RCOR3Q9P2K3 495 aaPredicted RBP3.06□□□□□ -1.92
CD44-219ENST00000525685 RABL2AQ9UBK7 228 aaPredicted RBP3.06□□□□□ -1.92
CD44-219ENST00000525685 LHX3Q9UBR4 397 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 TRIM10Q9UDY6 481 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 MOSPD1Q9UJG1 213 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 DIMT1Q9UNQ2 313 aaKnown RBP3.06□□□□□ -1.92
CD44-219ENST00000525685 PLA2G4CQ9UP65 541 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 ENTPD4Q9Y227 616 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 HS3ST2Q9Y278 367 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 MRPS2Q9Y399 296 aaKnown RBP3.06□□□□□ -1.92
CD44-219ENST00000525685 CSAG2Q9Y5P2 127 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 ALG6Q9Y672 507 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 hCG_1818297A0A087WSY0 165 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 IGHV1OR15-9A0A0B4J2B8 117 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CXorf51AA0A1B0GTR3 108 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 A0A1W2PPR1 153 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 ZSCAN5CA6NGD5 496 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 ARHGAP42A6NI28 874 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 ZNF487B1APH4 448 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 BOLA2-SMG1P6H3BVE0 249 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 TLR4O00206 839 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 DFFAO00273 331 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 MCF2LO15068 1137 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 ALOX15BO15296 676 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 PHF1O43189 567 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 PALMO75781 387 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 KIAA0754O94854 1291 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 IGSF6O95976 241 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 IGLV3-19P01714 112 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 IGHG1P01857 330 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CTSLP07711 333 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 GP9P14770 177 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 GATA2P23769 480 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 KDELR1P24390 212 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CHRNA3P32297 505 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 DRD3P35462 400 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CDKN2BP42772 138 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 RGRP47804 291 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 PITPNBP48739 271 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 TPMTP51580 245 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CCNHP51946 323 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 GTF2A1P52655 376 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 RPS4XP62701 263 aaKnown RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 GBE1Q04446 702 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 PPIDQ08752 370 aaKnown RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 SLC10A7Q0GE19 358 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CYLC2Q14093 348 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 ELAVL3Q14576 367 aaKnown RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 ABRAXAS2Q15018 415 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 EXOSC7Q15024 291 aaKnown RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 PAFAH1B3Q15102 231 aaKnown RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 PDK2Q15119 407 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CYTH1Q15438 398 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CST6Q15828 149 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 TTC31Q49AM3 519 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 EIPR1Q53HC9 387 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 UNC50Q53HI1 259 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CARD16Q5EG05 197 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 PIP5KL1Q5T9C9 394 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 ZNF774Q6NX45 483 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 MFSD7Q6UXD7 560 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CCBE1Q6UXH8 406 aaPredicted RBP3.05□□□□□ -1.92
CD44-219ENST00000525685 APOOLQ6UXV4 268 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 ASCL5Q7RTU5 278 aa3.05□□□□□ -1.92
CD44-219ENST00000525685 CEACAM19Q7Z692 300 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms