RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 CCL14Q16627 93 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 FAM83EQ2M2I3 478 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 HIKESHIQ53FT3 197 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 TNFAIP8L3Q5GJ75 292 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SPATA46Q5T0L3 261 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.99□□□□□ -1.93
CD44-217ENST00000525348 RIPPLY2Q5TAB7 128 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 LIPJQ5W064 366 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 ARMCX5Q6P1M9 558 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 EMBQ6PCB8 327 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CES3Q6UWW8 571 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 ARSKQ6UWY0 536 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 C17orf107Q6ZR85 190 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 NDUFAF7Q7L592 441 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 COPS6Q7L5N1 327 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 LHFPL3Q86UP9 236 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 AMZ2Q86W34 360 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 ENTHD1Q8IYW4 607 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SELENOHQ8IZQ5 122 aaKnown RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 CENPLQ8N0S6 344 aaPredicted RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 CYP4Z2PQ8N1L4 340 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 GPD1LQ8N335 351 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 TRAM1L1Q8N609 369 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CD177Q8N6Q3 437 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 FAM86B1Q8N7N1 296 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 ASCC1Q8N9N2 400 aaKnown RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 BHLHE23Q8NDY6 225 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 OR52H1Q8NGJ2 320 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 RHOXF1Q8NHV9 184 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 NANPQ8TBE9 248 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CD300LFQ8TDQ1 290 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 PAQR8Q8TEZ7 354 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 ING5Q8WYH8 240 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SMPDL3AQ92484 453 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 THRSPQ92748 146 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 FBXO32Q969P5 355 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 RFT1Q96AA3 541 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 ZNF641Q96N77 438 aaPredicted RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 PPP1R2P1Q96PQ5 205 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 TNFRSF13CQ96RJ3 184 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 INPP5KQ9BT40 448 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SLC19A3Q9BZV2 496 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SLITRK2Q9H156 845 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 C11orf49Q9H6J7 331 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 METTL7AQ9H8H3 244 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 ASCL3Q9NQ33 180 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 TNFRSF19Q9NS68 423 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 FAM212BQ9NTI7 297 aaPredicted RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 SPASTQ9UBP0 616 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 UBQLN2Q9UHD9 624 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 SCML1Q9UN30 329 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 RPH3ALQ9UNE2 315 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 LIPT1Q9Y234 373 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 STARD10Q9Y365 291 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 CPQQ9Y646 472 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 TEX264Q9Y6I9 313 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 PIK3C2BO00750 1634 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 AHDC1Q5TGY3 1603 aaPredicted RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 SPATA31E1Q6ZUB1 1445 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 DICER1Q9UPY3 1922 aaKnown RBP2.99□□□□□ -1.93
CD44-217ENST00000525348 KIAA0232Q92628 1395 aa2.99□□□□□ -1.93
CD44-217ENST00000525348 MROH7Q68CQ1 1323 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 BCL9LQ86UU0 1499 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 ILVBLA1L0T0 632 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 BTBD17A6NE02 478 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 HAS3O00219 553 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 PSMA7O14818 248 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 GMFGO60234 142 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 SELENOFO60613 162 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 JAK2O60674 1132 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 ECI2O75521 394 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 RPP14O95059 124 aaKnown RBP2.98□□□□□ -1.93
CD44-217ENST00000525348 TGFAP01135 160 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 IGHG3P01860 377 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 MT-ND1P03886 318 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 THY1P04216 161 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 SERPINA5P05154 406 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 FCER2P06734 321 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 IQCF3P0C7M6 154 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 SUPT20HL2P0C7V6 817 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 ETS2P15036 469 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 NQO1P15559 274 aaKnown RBP2.98□□□□□ -1.93
CD44-217ENST00000525348 CD1EP15812 388 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 SHMT2P34897 504 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 PCK1P35558 622 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 ELK3P41970 407 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 CRATP43155 626 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 ALDH3B1P43353 468 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 RAB13P51153 203 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 RBX1P62877 108 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 CCZ1BP86790 482 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 CCZ1P86791 482 aaPredicted RBP2.98□□□□□ -1.93
CD44-217ENST00000525348 CDK16Q00536 496 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 FLI1Q01543 452 aaPredicted RBP2.98□□□□□ -1.93
CD44-217ENST00000525348 CDH17Q12864 832 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 STX3Q13277 289 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 MAB21L1Q13394 359 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 MADCAM1Q13477 382 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 GRB7Q14451 532 aa2.98□□□□□ -1.93
CD44-217ENST00000525348 PON3Q15166 354 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms