RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 MBD3L3A6NE82 208 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ERICH4A6NGS2 130 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 MBD3L5A6NJ08 208 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 LIPT2A6NK58 231 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 GJE1A6NN92 205 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ENO4A6NNW6 628 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 A8MVM7 634 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 PRSS44E7EML9 344 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 LINC01387J3KSC0 135 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 M0R082 166 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 EBAG9O00559 213 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ZNF208O43345 1280 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 CHP2O43745 196 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 TNFSF13O75888 250 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 PRSS23O95084 383 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 RCBTB2O95199 551 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 HPRP00739 348 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 BGLAPP02818 100 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 SEMG1P04279 462 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 FABP3P05413 133 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 PNMTP11086 282 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 UMPSP11172 480 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 NQO1P15559 274 aaKnown RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 MAKP20794 623 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 GRPRP30550 384 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 RRM2P31350 389 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 UQCRC1P31930 480 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 CEACAM8P31997 349 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 NTF4P34130 210 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 KIR2DL2P43627 348 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 GPR4P46093 362 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 HTR3AP46098 478 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 SMSP52788 366 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 IST1P53990 364 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 FOXG1P55316 489 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 CTBP2P56545 445 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 RAC3P60763 192 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 SPIBQ01892 262 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 RASGEF1BQ0VAM2 473 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 FLOT2Q14254 428 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 SEC23BQ15437 767 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ZSWIM7Q19AV6 140 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 IQCCQ4KMZ1 466 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 DNAL1Q4LDG9 190 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 OTUD3Q5T2D3 398 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 RIPPLY2Q5TAB7 128 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 C9orf135Q5VTT2 229 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 CARD17Q5XLA6 110 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ANKRD34AQ69YU3 496 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 TMEM211Q6ICI0 200 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 PGM2L1Q6PCE3 622 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 PODNL1Q6PEZ8 512 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ZNF613Q6PF04 617 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 TTC33Q6PID6 262 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 GPAT4Q86UL3 456 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 IGFN1Q86VF2 1251 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ZDHHC21Q8IVQ6 265 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ADGRG5Q8IZF4 528 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ZNF610Q8N9Z0 462 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 MBD3L2Q8NHZ7 208 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ZNF417Q8TAU3 575 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 RNF128Q8TEB7 428 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 SLC25A43Q8WUT9 341 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 CANT1Q8WVQ1 401 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 RASSF5Q8WWW0 418 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 OIT3Q8WWZ8 545 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 LZICQ8WZA0 190 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 WNT2BQ93097 391 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ASB9Q96DX5 294 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 C7orf34Q96L11 122 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 PRRC1Q96M27 445 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ZNF385AQ96PM9 386 aaKnown RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ZNF587Q96SQ5 575 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 EMC6Q9BV81 110 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 TAPBPLQ9BX59 468 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 C1orf21Q9H246 121 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 GORASP2Q9H8Y8 452 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 RNF122Q9H9V4 155 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 NMNAT1Q9HAN9 279 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 HHATLQ9HCP6 504 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 MAN2C1Q9NTJ4 1040 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 C20orf141Q9NUB4 165 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 COQ3Q9NZJ6 369 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 NDUFAF4Q9P032 175 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ACTR3BQ9P1U1 418 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 STOML1Q9UBI4 398 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 IL20RAQ9UHF4 553 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 PRSS50Q9UI38 385 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ING1Q9UK53 422 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 MCTS1Q9ULC4 181 aaKnown RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 PRPF19Q9UMS4 504 aaKnown RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 SAMD4AQ9UPU9 718 aaKnown RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 POMPQ9Y244 141 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 SPIN1Q9Y657 262 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 ENPP4Q9Y6X5 453 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 U3KQV3 271 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 NUP214P35658 2090 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 SHANK1Q9Y566 2161 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 NINQ8N4C6 2090 aa4.09□□□□□ -1.75
CHMP4A-202ENST00000524955 SMG1Q96Q15 3661 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms