RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 SPAG4Q9NPE6 437 aa11.17□□□□□ -0.62
CCNC-216ENST00000523961 PLSCR4Q9NRQ2 329 aa11.17□□□□□ -0.62
CCNC-216ENST00000523961 ARL8BQ9NVJ2 186 aa11.17□□□□□ -0.62
CCNC-216ENST00000523961 KLHL13Q9P2N7 655 aa11.17□□□□□ -0.62
CCNC-216ENST00000523961 ABCD2Q9UBJ2 740 aa11.17□□□□□ -0.62
CCNC-216ENST00000523961 SETXQ7Z333 2677 aaKnown RBP11.16□□□□□ -0.62
CCNC-216ENST00000523961 A0A0B4J2E0 115 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 A0A1B0GX12 115 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 LIPT2A6NK58 231 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 GSTA4O15217 222 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 TPST2O60704 377 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 NPIPB7O75200 414 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 AHSA1O95433 338 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 IMPDH2P12268 514 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 FPR1P21462 350 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 GSK3BP49841 420 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 MNAT1P51948 309 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 SORDQ00796 357 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 CEACAM7Q14002 265 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 KRT72Q14CN4 511 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 PDK3Q15120 406 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 LRRC23Q53EV4 343 aaPredicted RBP11.16□□□□□ -0.62
CCNC-216ENST00000523961 CYBRD1Q53TN4 286 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 SWT1Q5T5J6 900 aaKnown RBP11.16□□□□□ -0.62
CCNC-216ENST00000523961 C1orf140Q5VVS0 124 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 ABLIM2Q6H8Q1 611 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 ZNF613Q6PF04 617 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 PAQR6Q6TCH4 344 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 C5orf46Q6UWT4 87 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 STK32CQ86UX6 486 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 TUSC5Q8IXB3 177 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 FITM2Q8N6M3 262 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 ZNF610Q8N9Z0 462 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 OR6T1Q8NGN1 323 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 VANGL1Q8TAA9 524 aaPredicted RBP11.16□□□□□ -0.62
CCNC-216ENST00000523961 RNF217Q8TC41 542 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 SLC38A4Q969I6 547 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 KCTD14Q9BQ13 255 aaPredicted RBP11.16□□□□□ -0.62
CCNC-216ENST00000523961 PSD2Q9BQI7 771 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 TAPBPLQ9BX59 468 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 OPN3Q9H1Y3 402 aaPredicted RBP11.16□□□□□ -0.62
CCNC-216ENST00000523961 BCO1Q9HAY6 547 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 FANCFQ9NPI8 374 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 NDE1Q9NXR1 346 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 GALNT8Q9NY28 637 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 ELOVL5Q9NYP7 299 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 ADA2Q9NZK5 511 aa11.16□□□□□ -0.62
CCNC-216ENST00000523961 GMPR2Q9P2T1 348 aaKnown RBP11.16□□□□□ -0.62
CCNC-216ENST00000523961 A0A087WUJ7 227 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 ZNF724A8MTY0 619 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 CXCR6O00574 342 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 HOXB1P14653 301 aaPredicted RBP11.15□□□□□ -0.62
CCNC-216ENST00000523961 KLK2P20151 261 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 CPOXP36551 454 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 CD79BP40259 229 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 KIR2DL3P43628 341 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 H3F3AP84243 136 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 OR7A5Q15622 319 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 NPTX1Q15818 432 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 ZNF474Q6S9Z5 364 aaPredicted RBP11.15□□□□□ -0.62
CCNC-216ENST00000523961 GDF7Q7Z4P5 450 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 CARM1Q86X55 608 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 PGAM4Q8N0Y7 254 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 MFSD8Q8NHS3 518 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 LZICQ8WZA0 190 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 PCDHAC1Q9H158 963 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 ADPRHL2Q9NX46 363 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 EMC3Q9P0I2 261 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 KCNN3Q9UGI6 736 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 ING1Q9UK53 422 aaPredicted RBP11.15□□□□□ -0.62
CCNC-216ENST00000523961 SH3GLB1Q9Y371 365 aa11.15□□□□□ -0.62
CCNC-216ENST00000523961 UNC79Q9P2D8 2635 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 IGKV3D-15A0A087WSY6 115 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 TRAPPC13A5PLN9 417 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 TUBAL3A6NHL2 446 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 CPSF4LA6NMK7 179 aaKnown RBP11.14□□□□□ -0.63
CCNC-216ENST00000523961 GPR171O14626 319 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 CHP2O43745 196 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 OR2T1O43869 369 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 POU2F1P14859 743 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 SSTR2P30874 369 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 SLC16A1P53985 500 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 CDH12P55289 794 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 SELENOWP63302 87 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 MXRA7P84157 204 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 EGR4Q05215 589 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 ENTPD8Q5MY95 495 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 OTUD3Q5T2D3 398 aaPredicted RBP11.14□□□□□ -0.63
CCNC-216ENST00000523961 C16orf89Q6UX73 402 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 BEND4Q6ZU67 534 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 NUFIP2Q7Z417 695 aaKnown RBP11.14□□□□□ -0.63
CCNC-216ENST00000523961 GALNT5Q7Z7M9 940 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 RBM45Q8IUH3 476 aaKnown RBP11.14□□□□□ -0.63
CCNC-216ENST00000523961 CCDC103Q8IW40 242 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 OR4D11Q8NGI4 311 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 BCAS4Q8TDM0 211 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 ADAMTS16Q8TE57 1224 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 C14orf79Q96F83 325 aa11.14□□□□□ -0.63
CCNC-216ENST00000523961 NSL1Q96IY1 281 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms