RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 OR56A1Q8NGH5 318 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 OR51F2Q8NH61 342 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 SDF2Q99470 211 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 CCT7Q99832 543 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 ZNF747Q9BV97 191 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 CCDC106Q9BWC9 280 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 SUCNR1Q9BXA5 334 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 SERHL2Q9H4I8 314 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 ZNF696Q9H7X3 374 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 GPATCH2Q9NW75 528 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 FZR1Q9UM11 496 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 HDGFL3Q9Y3E1 203 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 VWFP04275 2813 aa10.05□□□□□ -0.8
SDCBP-211ENST00000523441 TMED7-TICAM2A0A0A6YYA0 188 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 EXOC1LA0A1B0GW35 172 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 TMEM129A0AVI4 362 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 TMEM72A0PK05 275 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 ZC3H12DA2A288 527 aaKnown RBP10.04□□□□□ -0.8
SDCBP-211ENST00000523441 CLDN24A6NM45 220 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 ZNF587BE7ETH6 402 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 SLC28A1O00337 649 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 AP3D1O14617 1153 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 UGT2B17O75795 530 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 SEC14L2O76054 403 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 PDE5AO76074 875 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 HPXP02790 462 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 KRT16P08779 473 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 IGFBP1P08833 259 aaPredicted RBP10.04□□□□□ -0.8
SDCBP-211ENST00000523441 GAAP10253 952 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 MYL2P10916 166 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 IMPDH2P12268 514 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 ALDH3B1P43353 468 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 ASMTP46597 345 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 LIMS1P48059 325 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 SELENOPP49908 381 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 SLC35A1P78382 337 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 PDE7AQ13946 482 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 MAD2L1BPQ15013 274 aaPredicted RBP10.04□□□□□ -0.8
SDCBP-211ENST00000523441 OR7A5Q15622 319 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 MAPK14Q16539 360 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 AVPI1Q5T686 147 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 ADGRG3Q86Y34 549 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 DDIASQ8IXT1 998 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 GSPT2Q8IYD1 628 aaKnown RBP10.04□□□□□ -0.8
SDCBP-211ENST00000523441 ZDHHC22Q8N966 263 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 OR4F15Q8NGB8 312 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 IFT81Q8WYA0 676 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 SYT3Q9BQG1 590 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 CRLF2Q9HC73 371 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 ZDHHC18Q9NUE0 388 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 DDX28Q9NUL7 540 aaKnown RBP10.04□□□□□ -0.8
SDCBP-211ENST00000523441 TMED7Q9Y3B3 224 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 CCL27Q9Y4X3 112 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 CORINQ9Y5Q5 1042 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 TRRAPQ9Y4A5 3859 aa10.04□□□□□ -0.8
SDCBP-211ENST00000523441 NPIPB8E9PQR5 432 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 ETV2O00321 342 aaPredicted RBP10.03□□□□□ -0.8
SDCBP-211ENST00000523441 SCAMP2O15127 329 aaKnown RBP10.03□□□□□ -0.8
SDCBP-211ENST00000523441 STX11O75558 287 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 UROSP10746 265 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 MATN1P21941 496 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 SEC24CP53992 1094 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 UBA52P62987 128 aaKnown RBP10.03□□□□□ -0.8
SDCBP-211ENST00000523441 MVKQ03426 396 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 CEACAM7Q14002 265 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 DAG1Q14118 895 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 SLC17A1Q14916 467 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 ELFN2Q5R3F8 820 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 NIPAL3Q6P499 406 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 FRMD7Q6ZUT3 714 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 LINGO2Q7L985 606 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 GRINAQ7Z429 371 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 R3HCC1LQ7Z5L2 792 aaKnown RBP10.03□□□□□ -0.8
SDCBP-211ENST00000523441 ABHD12BQ7Z5M8 362 aaPredicted RBP10.03□□□□□ -0.8
SDCBP-211ENST00000523441 CCDC63Q8NA47 563 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 OR9K2Q8NGE7 335 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 KIF18AQ8NI77 898 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 BCL2L2Q92843 193 aaPredicted RBP10.03□□□□□ -0.8
SDCBP-211ENST00000523441 DDIT4LQ96D03 193 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 ANKRD27Q96NW4 1050 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 C1orf50Q9BV19 199 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 UNKLQ9H9P5 680 aaKnown RBP10.03□□□□□ -0.8
SDCBP-211ENST00000523441 ZNF275Q9NSD4 429 aaPredicted RBP10.03□□□□□ -0.8
SDCBP-211ENST00000523441 ADPRHL2Q9NX46 363 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 REV1Q9UBZ9 1251 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 ZDHHC2Q9UIJ5 367 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 WNK2Q9Y3S1 2297 aa10.03□□□□□ -0.8
SDCBP-211ENST00000523441 ARHGAP32A7KAX9 2087 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 IGHV2OR16-5A0A0B4J2B6 119 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 ANKRD28O15084 1053 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 CDC14BO60729 498 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 EIF1BO60739 113 aaKnown RBP10.02□□□□□ -0.81
SDCBP-211ENST00000523441 TBX19O60806 448 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 UPK3AO75631 287 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 MPZL1O95297 269 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 BCKDHAP12694 445 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 TACR3P29371 465 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 PGM1P36871 562 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 ARFIP2P53365 341 aa10.02□□□□□ -0.81
SDCBP-211ENST00000523441 H3F3AP84243 136 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms