RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 LIPCP11150 499 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 CDK2P24941 298 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 DDX6P26196 483 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 CDK5R1Q15078 307 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 TAF13Q15543 124 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 CLVS2Q5SYC1 327 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 GLDNQ6ZMI3 551 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 PAQR7Q86WK9 346 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 TMEFF1Q8IYR6 380 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 LNX2Q8N448 690 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 ZNF676Q8N7Q3 588 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 OR4E2Q8NGC2 313 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 MS4A6EQ96DS6 147 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 DNAJA3Q96EY1 480 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 LGR4Q9BXB1 951 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 TSPAN10Q9H1Z9 355 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 ADGRL4Q9HBW9 690 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 KCMF1Q9P0J7 381 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 TBX19O60806 448 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 SC5DO75845 299 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 F3P13726 295 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 ITPKBP27987 946 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 MNDAP41218 407 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 RAB28P51157 221 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 ACTA2P62736 377 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 TRA2BP62995 288 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 ACTG2P63267 376 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 CBFBQ13951 182 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 NHLRC3Q5JS37 347 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 LIN54Q6MZP7 749 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 LINC01555Q8NAE3 123 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 TMEM185AQ8NFB2 350 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 DVL3Q92997 716 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 MARC2Q969Z3 335 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 SMIM19Q96E16 107 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 MS4A4EQ96PG1 132 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 GPR34Q9UPC5 381 aa11.84□□□□□ -0.51
TRAPPC9-208ENST00000520857 SELENOFO60613 162 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 PAK4O96013 591 aaPredicted RBP11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 GABRA3P34903 492 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 ARHGAP19Q14CB8 494 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 RPE65Q16518 533 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 MFSD12Q6NUT3 480 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 TMEM88Q6PEY1 159 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 KRT77Q7Z794 578 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 SLC39A11Q8N1S5 342 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 OR4K14Q8NGD5 310 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 INSM2Q96T92 566 aaPredicted RBP11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 ATPIF1Q9UII2 106 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 FBXL3Q9UKT7 428 aa11.83□□□□□ -0.51
TRAPPC9-208ENST00000520857 TBC1D3EA0A087X179 549 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 MFSD2BA6NFX1 497 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 GRXCR1A8MXD5 290 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 D6RAR5 112 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 TPPPO94811 219 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 SCGB2B2Q4G0G5 96 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 DMKNQ6E0U4 476 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 BMPERQ8N8U9 685 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 SLC38A3Q99624 504 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 WASH6PQ9NQA3 447 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 ADAM18Q9Y3Q7 739 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 TRPM7Q96QT4 1865 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 TRAV18A0A075B6X5 111 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 KANTRA0A1W2PQU2 76 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 GXYLT2A0PJZ3 443 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 IFITM5A6NNB3 132 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 RAD1O60671 282 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 LILRB5O75023 590 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 IGF2P01344 180 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 ADH1AP07327 375 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 FRKP42685 505 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 BAMBIQ13145 260 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF169Q14929 603 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 TCEAL5Q5H9L2 206 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 RPL13AP3Q6NVV1 102 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 ARHGAP11AQ6P4F7 1023 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 HAGHLQ6PII5 290 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 ATRAIDQ6UW56 229 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 WDR88Q6ZMY6 472 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR10G6Q8NH81 332 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 VOPP1Q96AW1 172 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 PGLYRP3Q96LB9 341 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 TAS2R5Q9NYW4 299 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 PCDHGA5Q9Y5G8 931 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 F5P12259 2224 aa11.83□□□□□ -0.52
TRAPPC9-208ENST00000520857 BLOC1S5-TXNDC5H3BN57 136 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 BHLHE40O14503 412 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 NARSO43776 548 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 LDB3O75112 727 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 ACHEP22303 614 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 CMPK1P30085 196 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 NNATQ16517 81 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 TRMT12Q53H54 448 aaKnown RBP11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 ALG10BQ5I7T1 473 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 TSSK4Q6SA08 328 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 BEST3Q8N1M1 668 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 NMNAT3Q96T66 252 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 FKRPQ9H9S5 495 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 FBXO34Q9NWN3 711 aa11.82□□□□□ -0.52
TRAPPC9-208ENST00000520857 EMC3Q9P0I2 261 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms