RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 TBC1D3CQ6IPX1 549 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 SLC30A6Q6NXT4 461 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 SMARCD3Q6STE5 483 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 FAM131AQ6UXB0 335 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 PAMR1Q6UXH9 720 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 WDR88Q6ZMY6 472 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 NUP54Q7Z3B4 507 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 MARCH9Q86YJ5 346 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 CPOQ8IVL8 374 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 C7orf61Q8IZ16 206 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 TBC1D3Q8IZP1 549 aaPredicted RBP4.64□□□□□ -1.67
SDC2-204ENST00000519914 TCTE3Q8IZS6 198 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 OR8H2Q8N162 312 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 SYS1Q8N2H4 156 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 SIRT6Q8N6T7 355 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 SYT14Q8NB59 555 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 ATP6V1C2Q8NEY4 427 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 BBS1Q8NFJ9 593 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 OR4F15Q8NGB8 312 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 OR52L1Q8NGH7 329 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 OR5M3Q8NGP4 307 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 NEIL3Q8TAT5 605 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 FANK1Q8TC84 345 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 LIPHQ8WWY8 451 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 FAM3CQ92520 227 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 SLC7A6Q92536 515 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 PHYHIPQ92561 330 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 ANKRD9Q96BM1 317 aaPredicted RBP4.64□□□□□ -1.67
SDC2-204ENST00000519914 C1GALT1C1Q96EU7 318 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 MSANTD3Q96H12 275 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 SENP5Q96HI0 755 aaPredicted RBP4.64□□□□□ -1.67
SDC2-204ENST00000519914 DIRAS2Q96HU8 199 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 RNF170Q96K19 258 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 MRGPRX1Q96LB2 322 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 SAMD8Q96LT4 415 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 CMTM3Q96MX0 182 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 ZNF578Q96N58 590 aaPredicted RBP4.64□□□□□ -1.67
SDC2-204ENST00000519914 NEDD4LQ96PU5 975 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 GPX7Q96SL4 187 aaPredicted RBP4.64□□□□□ -1.67
SDC2-204ENST00000519914 DDOQ99489 341 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 TM9SF2Q99805 663 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 TTYH2Q9BSA4 534 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 TMEM43Q9BTV4 400 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 TRIM2Q9C040 744 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 B3GNT4Q9C0J1 378 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 C11orf54Q9H0W9 315 aaPredicted RBP4.64□□□□□ -1.67
SDC2-204ENST00000519914 RNF121Q9H920 327 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 UCK1Q9HA47 277 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 FOLH1BQ9HBA9 442 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 CD93Q9NPY3 652 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 EQTNQ9NQ60 294 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 CYSLTR2Q9NS75 346 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 ZNF275Q9NSD4 429 aaPredicted RBP4.64□□□□□ -1.67
SDC2-204ENST00000519914 AP5S1Q9NUS5 200 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 C14orf119Q9NWQ9 140 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 BABAM2Q9NXR7 383 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 CLDND1Q9NY35 253 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 H2AFY2Q9P0M6 372 aaPredicted RBP4.64□□□□□ -1.67
SDC2-204ENST00000519914 USP36Q9P275 1121 aaKnown RBP4.64□□□□□ -1.67
SDC2-204ENST00000519914 GLS2Q9UI32 602 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 KLHL21Q9UJP4 597 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 ZNF221Q9UK13 617 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 POU2F3Q9UKI9 436 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 SLC7A7Q9UM01 511 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 SLC35A3Q9Y2D2 325 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 NTNG1Q9Y2I2 539 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 GPR52Q9Y2T5 361 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 MED31Q9Y3C7 131 aa4.64□□□□□ -1.67
SDC2-204ENST00000519914 HEATR5AQ86XA9 2040 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 MKI67P46013 3256 aaKnown RBP4.63□□□□□ -1.67
SDC2-204ENST00000519914 LOC105369274A0A096LPK9 316 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 TRAV1-2A0A0B4J238 106 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 A0A0G2JK05 382 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 LOC102723532A0A0G2JNH3 316 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 PRR23AA6NEV1 266 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 EPOPA6NHQ4 379 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 OR6C65A6NJZ3 312 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 EFCAB7A8K855 629 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 CENPXA8MT69 81 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 C12orf71A8MTZ7 269 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 CASKO14936 926 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 ARPC3O15145 178 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 OGG1O15527 345 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 RGS5O15539 181 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 NARSO43776 548 aaKnown RBP4.63□□□□□ -1.67
SDC2-204ENST00000519914 DNAJB6O75190 326 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 SLC2A10O95528 541 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 KLF8O95600 359 aaPredicted RBP4.63□□□□□ -1.67
SDC2-204ENST00000519914 NTN1O95631 604 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 WDPCPO95876 746 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 TNFP01375 233 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 STATHP02808 62 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 MT-ND5P03915 603 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 SBK2P0C263 348 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 CT62P0C5K7 136 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 PEPDP12955 493 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 IFI30P13284 250 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 PRG2P13727 222 aa4.63□□□□□ -1.67
SDC2-204ENST00000519914 GLULP15104 373 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms