RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ZNF471Q9BX82 626 aaPredicted RBP10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF700Q9H0M5 742 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC25A18Q9H1K4 315 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 C2orf42Q9NWW7 574 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 B3GNT2Q9NY97 397 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 PDCD11Q14690 1871 aaKnown RBP10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC22A5O76082 557 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 PDGFAP04085 211 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 F13BP05160 661 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 SFTPBP07988 381 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 UBL4AP11441 157 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 HERV-K104P61576 105 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 GPR18Q14330 331 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR1Q1Q15612 314 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 YIF1BQ5BJH7 314 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 C12orf73Q69YU5 71 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 SIGIRRQ6IA17 410 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR4M1Q8NGD0 313 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR14L1PQ8NHC6 308 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 TM4SF18Q96CE8 201 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR5B2Q96R09 309 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 MS4A8Q9BY19 250 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 PITHD1Q9GZP4 211 aaPredicted RBP10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR2S2Q9NQN1 319 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 BABAM2Q9NXR7 383 aa10.06□□□□□ -0.8
PCDHGA1-202ENST00000517417 PAHP00439 452 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 UGT2B7P16662 529 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 ELK1P19419 428 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 SHC1P29353 583 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 RBMS1P29558 406 aaKnown RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 PRPS1P60891 318 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 TRA2BP62995 288 aaKnown RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 HBMQ6B0K9 141 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 POTEKPQ9BYX7 375 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 FGF22Q9HCT0 170 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 ACOXLQ9NUZ1 547 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 NYNRINQ9P2P1 1898 aaKnown RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 PLXNB2O15031 1838 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 B8ZZF3 427 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 HMGN4O00479 90 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 PTH2RP49190 550 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 EVX1P49640 407 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 HENMT1Q5T8I9 393 aaKnown RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 RHBDD1Q8TEB9 315 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR2M2Q96R28 347 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 GLIPR2Q9H4G4 154 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 MED20Q9H944 212 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 CD93Q9NPY3 652 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 THAP10Q9P2Z0 257 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 DHCR7Q9UBM7 475 aaKnown RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 MBD1Q9UIS9 605 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC5A10A0PJK1 596 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 PLPP1O14494 284 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 SOCS6O14544 535 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 HMGA2P52926 109 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 EIF5AP63241 154 aaKnown RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 COL28A1Q2UY09 1125 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 ACSM3Q53FZ2 586 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 RAB12Q6IQ22 244 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 LRRN1Q6UXK5 716 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 PRICKLE2Q7Z3G6 844 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 GOT1L1Q8NHS2 421 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 URM1Q9BTM9 101 aaKnown RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 C1QTNF2Q9BXJ5 285 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF350Q9GZX5 532 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 TREM1Q9NP99 234 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 SERTM1A2A2V5 107 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 LRRTM2O43300 516 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 TRIM23P36406 574 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 RBMXP38159 391 aaKnown RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 SRP9P49458 86 aaKnown RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 MRPS21P82921 87 aaKnown RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 DLX2Q07687 328 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 CHRFAM7AQ494W8 412 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC22A10Q63ZE4 541 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC35F2Q8IXU6 374 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC16A11Q8NCK7 471 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 MAP6Q96JE9 813 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 FAM71F1Q96KD3 344 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 ASB16Q96NS5 453 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 MED18Q9BUE0 208 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 BTBD2Q9BX70 525 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 POLE3Q9NRF9 147 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 CBLCQ9ULV8 474 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 POLHQ9Y253 713 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR51B4Q9Y5P0 310 aa10.05□□□□□ -0.8
PCDHGA1-202ENST00000517417 F5H5K5 113 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 CAPZA1P52907 286 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 CSNK1G2P78368 415 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZP2Q05996 745 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 TPBGQ13641 420 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 SHHQ15465 462 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR7A5Q15622 319 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF100Q8IYN0 542 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 GPR137CQ8N3F9 429 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR13C2Q8NGS9 318 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 GIMAP1Q8WWP7 306 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 C4orf36Q96KX1 117 aa10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 PLEKHB1Q9UF11 243 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA1-202ENST00000517417 NUP50Q9UKX7 468 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms