RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 SF3B5Q9BWJ5 86 aaKnown RBP13.14□□□□□ -0.31
DDR1-278ENST00000515233 PIF1Q9H611 641 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 TMEM72A0PK05 275 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 AGAP5A6NIR3 686 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 HMGN4O00479 90 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 AP3D1O14617 1153 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 TYROBPO43914 113 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 CPSF4O95639 269 aaKnown RBP13.13□□□□□ -0.31
DDR1-278ENST00000515233 CREB1P16220 341 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 PAX7P23759 505 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 TACR3P29371 465 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 SLC1A3P43003 542 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 KHKP50053 298 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 PDLIM4P50479 330 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 DPY19L1Q2PZI1 675 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 NUDCD3Q8IVD9 361 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 LRRC34Q8IZ02 419 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 ARIH2OSQ8N7S6 290 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 POMGNT2Q8NAT1 580 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 TRNT1Q96Q11 434 aaKnown RBP13.13□□□□□ -0.31
DDR1-278ENST00000515233 ADAM19Q9H013 955 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 SLC38A1Q9H2H9 487 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 MTHFD2LQ9H903 347 aaPredicted RBP13.13□□□□□ -0.31
DDR1-278ENST00000515233 OBP2BQ9NPH6 170 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 MARCOQ9UEW3 520 aaPredicted RBP13.13□□□□□ -0.31
DDR1-278ENST00000515233 MOKQ9UQ07 419 aa13.13□□□□□ -0.31
DDR1-278ENST00000515233 SVEP1Q4LDE5 3571 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 ATP6V1G2-DDX39BF2Z307 99 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 ITM2AO43736 263 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 LY6HO94772 140 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 ZNF16P17020 682 aaPredicted RBP13.12□□□□□ -0.31
DDR1-278ENST00000515233 CHI3L1P36222 383 aaPredicted RBP13.12□□□□□ -0.31
DDR1-278ENST00000515233 NR4A2P43354 598 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 TXNL4AP83876 142 aaKnown RBP13.12□□□□□ -0.31
DDR1-278ENST00000515233 HPCAP84074 193 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 GSTA3Q16772 222 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 OTUD3Q5T2D3 398 aaPredicted RBP13.12□□□□□ -0.31
DDR1-278ENST00000515233 FAM166AQ6J272 317 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 LRRC74BQ6ZQY2 392 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 AAED1Q7RTV5 226 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 ABHD12BQ7Z5M8 362 aaPredicted RBP13.12□□□□□ -0.31
DDR1-278ENST00000515233 ZIC4Q8N9L1 334 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 SLC35A5Q9BS91 424 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 MYOZ1Q9NP98 299 aaPredicted RBP13.12□□□□□ -0.31
DDR1-278ENST00000515233 BTNL2Q9UIR0 455 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 KCNS2Q9ULS6 477 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.12□□□□□ -0.31
DDR1-278ENST00000515233 FKBP7Q9Y680 259 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 MALRD1Q5VYJ5 2156 aa13.12□□□□□ -0.31
DDR1-278ENST00000515233 LOC390937A0A1W2PQ73 354 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 ZC3H12DA2A288 527 aaKnown RBP13.11□□□□□ -0.31
DDR1-278ENST00000515233 SNUPNO95149 360 aaKnown RBP13.11□□□□□ -0.31
DDR1-278ENST00000515233 GPIP06744 558 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 MYZAPP0CAP1 466 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 IL7RP16871 459 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 SRD5A1P18405 259 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 RPS4Y1P22090 263 aaKnown RBP13.11□□□□□ -0.31
DDR1-278ENST00000515233 IGFBP5P24593 272 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 CLNS1AP54105 237 aaKnown RBP13.11□□□□□ -0.31
DDR1-278ENST00000515233 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 EPS8Q12929 822 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 GNA13Q14344 377 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 PDCD2Q16342 344 aaPredicted RBP13.11□□□□□ -0.31
DDR1-278ENST00000515233 SYPL1Q16563 259 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 SPANXN4Q5MJ08 99 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 HMGN2P46Q86SG4 172 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 TMEM99Q8N816 258 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 ZNF781Q8N8C0 355 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 ANKFN1Q8N957 763 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 FBXO17Q96EF6 278 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 PPP1R36Q96LQ0 422 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 CCDC115Q96NT0 180 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 ZNF385AQ96PM9 386 aaKnown RBP13.11□□□□□ -0.31
DDR1-278ENST00000515233 SORCS2Q96PQ0 1159 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 PIMREGQ9BSJ6 248 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 PRR14Q9BWN1 585 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 TMEM45AQ9NWC5 275 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 RAP2CQ9Y3L5 183 aa13.11□□□□□ -0.31
DDR1-278ENST00000515233 IGHV1-18A0A0C4DH31 117 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 LOC100289279A0A1B0GTE1 492 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 SLC35F4A4IF30 521 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 CFAP73A6NFT4 308 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 LIPT2A6NK58 231 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 AQP7P3A6NL99 342 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 KLF11O14901 512 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 AKR7A3O95154 331 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 C1QCP02747 245 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 SERPINE1P05121 402 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 CHRM4P08173 479 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 UQCRBP14927 111 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 LBPP18428 481 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 RPL14P50914 215 aaKnown RBP13.1□□□□□ -0.31
DDR1-278ENST00000515233 ANXA11P50995 505 aaKnown RBP13.1□□□□□ -0.31
DDR1-278ENST00000515233 ABCE1P61221 599 aaKnown RBP13.1□□□□□ -0.31
DDR1-278ENST00000515233 CEACAM7Q14002 265 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 GGTLC2Q14390 218 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 C3orf36Q3SXR2 165 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 KLHL24Q6TFL4 600 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 RNF130Q86XS8 419 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 TRIML2Q8N7C3 387 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms