RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 NUMA1Q14980 2115 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 H0YGG7 62 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 UBL3O95164 117 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 SYPP08247 313 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-213ENST00000514442 CPEP16870 476 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 EVX1P49640 407 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 VEGFCP49767 419 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 MEOX2P50222 304 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 S100A10P60903 97 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 ARF3P61204 181 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-213ENST00000514442 RPL13AP3Q6NVV1 102 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 OR2L8Q8NGY9 312 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 C3orf49Q96BT1 292 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 IL20Q9NYY1 176 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 UGT2B7P16662 529 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 CTHP32929 405 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 C9orf50Q5SZB4 431 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 LEG1Q6P5S2 330 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 B3GLCTQ6Y288 498 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 ZNF546Q86UE3 836 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 VRK2Q86Y07 508 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 ZNF619Q8N2I2 560 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 OR5L2Q8NGL0 311 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 RHBDD1Q8TEB9 315 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 MARC2Q969Z3 335 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 OR2S2Q9NQN1 319 aa12.23□□□□□ -0.45
TCOF1-213ENST00000514442 ZNF208O43345 1280 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 CLUP10909 449 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 NR2C1P13056 603 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 ELK1P19419 428 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 GDNFP39905 211 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 ADH7P40394 386 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 ILKQ13418 452 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 DCST2Q5T1A1 773 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 C18orf63Q68DL7 685 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 PTCRAQ6ISU1 281 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-213ENST00000514442 LURAP1Q96LR2 239 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 LINC00052Q96N35 136 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 MED18Q9BUE0 208 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 P2RY12Q9H244 342 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 SMCHD1A6NHR9 2005 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 CDC14CA4D256 554 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 SLC22A31A6NKX4 558 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 ACOT7O00154 380 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 OR1D4P47884 311 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 TNFRSF17Q02223 184 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 AFMIDQ63HM1 303 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 TMEM65Q6PI78 240 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 OR8D4Q8NGM9 314 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 OR10Z1Q8NGY1 313 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 ZNF582Q96NG8 517 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-213ENST00000514442 KATNB1Q9BVA0 655 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 SLC25A32Q9H2D1 315 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 PIGMQ9H3S5 423 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 IKZF5Q9H5V7 419 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 ASB6Q9NWX5 421 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 OR6C65A6NJZ3 312 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 PIP5K1CO60331 668 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 TPT1P13693 172 aaKnown RBP12.22□□□□□ -0.45
TCOF1-213ENST00000514442 CR2P20023 1033 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 RFX2P48378 723 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 HENMT1Q5T8I9 393 aaKnown RBP12.22□□□□□ -0.45
TCOF1-213ENST00000514442 ARHGAP11AQ6P4F7 1023 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 ADAMTSL4Q6UY14 1074 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 ACBD4Q8NC06 268 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 MARVELD3Q96A59 401 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 OR7D2Q96RA2 312 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 USB1Q9BQ65 265 aaKnown RBP12.22□□□□□ -0.45
TCOF1-213ENST00000514442 H0Y8X5 98 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 H0YIV9 168 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 AIPO00170 330 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 B3GALT4O96024 378 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 CSTBP04080 98 aaKnown RBP12.22□□□□□ -0.45
TCOF1-213ENST00000514442 H2BFMP0C1H6 154 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 CBR1P16152 277 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 PFN3P60673 137 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 PCGF3Q3KNV8 242 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 GGTA1PQ4G0N0 100 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 PIP5KL1Q5T9C9 394 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 UBTD2Q8WUN7 234 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 PDXPQ96GD0 296 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 SYT4Q9H2B2 425 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 CSNK1G3Q9Y6M4 447 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 V9GYH0 126 aa12.22□□□□□ -0.45
TCOF1-213ENST00000514442 TRBV4-1A0A0J9YWV2 114 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 ZNF98A6NK75 572 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 CTXN1P60606 82 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 SEC61A1P61619 476 aaKnown RBP12.21□□□□□ -0.45
TCOF1-213ENST00000514442 ACY1Q03154 408 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 ADIPOR2Q86V24 386 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 NLRP8Q86W28 1048 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 TBC1D20Q96BZ9 403 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 PINK1Q9BXM7 581 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 GAREM1Q9H706 876 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 IL21Q9HBE4 155 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 SLC6A20Q9NP91 592 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 ZNF878C9JN71 531 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 PET100P0DJ07 73 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 S1PR1P21453 382 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms