RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	CPSF4L	A6NMK7	179 aa	Known RBP	10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	SNRPGP15	A8MWD9	76 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	NPIPB8	E9PQR5	432 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	SURF4	O15260	269 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	GSTZ1	O43708	216 aa	Predicted RBP	10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	LEFTY1	O75610	366 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	SNAPC5	O75971	98 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	IGHA1	P01876	353 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	ATP1B2	P14415	290 aa	Predicted RBP	10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	TAS2R41	P59536	307 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	CAP1	Q01518	475 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	TAF13	Q15543	124 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	ENTPD8	Q5MY95	495 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	FCRLA	Q7L513	359 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	SLC29A4	Q7RTT9	530 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	ASB11	Q8WXH4	323 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	SMPDL3B	Q92485	455 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	ZNF607	Q96SK3	696 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	VRK1	Q99986	396 aa	Predicted RBP	10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	SLC25A18	Q9H1K4	315 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	MRPS30	Q9NP92	439 aa	Known RBP	10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	ZDHHC3	Q9NYG2	299 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	TMEM272	A0A1B0GTI8	110 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	MEIS3P1	A6NDR6	274 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	EIF4E2	O60573	245 aa	Known RBP	10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	SAG	P10523	405 aa	Predicted RBP	10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	NDUFB7	P17568	137 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	GSTM3	P21266	225 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	PSMA3	P25788	255 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	HTR1F	P30939	366 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	MPI	P34949	423 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	C21orf58	P58505	322 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	DCD	P81605	110 aa	Known RBP	10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	RNF212	Q495C1	297 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	LY6G5C	Q5SRR4	150 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	NCMAP	Q5T1S8	102 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	DNAAF1	Q8NEP3	725 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	C16orf78	Q8WTQ4	265 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	DNAJA3	Q96EY1	480 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	BBS4	Q96RK4	519 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	NAA11	Q9BSU3	229 aa	Predicted RBP	10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	XKR8	Q9H6D3	395 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	MARCH5	Q9NX47	278 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	CCL26	Q9Y258	94 aa		10.3	□□□□□ -0.76
PDCD6-210	ENST00000513582	FEZF1	A0PJY2	475 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	TBC1D3B	A6NDS4	549 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582		F5H0A9	414 aa	Predicted RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	KLHL18	O94889	574 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	HCCS	P53701	268 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	PNLIPRP2	P54317	469 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	ZNF805	Q5CZA5	627 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	TMEM69	Q5SWH9	247 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	MISP	Q8IVT2	679 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	CNTNAP3B	Q96NU0	1288 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	NDC1	Q9BTX1	674 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	FAM117A	Q9C073	453 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	CHST6	Q9GZX3	395 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	IGFLR1	Q9H665	355 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	SEBOX	Q9HB31	216 aa	Predicted RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	CABIN1	Q9Y6J0	2220 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	DOCK6	Q96HP0	2047 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	NAP1L6	A6NFF2	107 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	COLCA2	A8K830	154 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	C2orf74	A8MZ97	194 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	NDUFB6	O95139	128 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	ZDHHC11B	P0C7U3	371 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	PRG2	P13727	222 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	APEH	P13798	732 aa	Known RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	MUC1	P15941	1255 aa	Predicted RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	CASP6	P55212	293 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	CCIN	Q13939	588 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	CSRP2	Q16527	193 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	HYAL4	Q2M3T9	481 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	ELFN2	Q5R3F8	820 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	FCRLB	Q6BAA4	426 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	UQCC3	Q6UW78	93 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	LRRC56	Q8IYG6	542 aa	Predicted RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	BEST3	Q8N1M1	668 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	C12orf76	Q8N812	135 aa	Predicted RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	PHOSPHO2	Q8TCD6	241 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	GTF3A	Q92664	365 aa	Known RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	CLCC1	Q96S66	551 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	KLHL31	Q9H511	634 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	ABRACL	Q9P1F3	81 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	EXOG	Q9Y2C4	368 aa	Known RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	TRAV14DV4	A0A0A6YYC5	116 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582		A0A0A6YYC8	382 aa	Predicted RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR2AT4	A6NND4	320 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	GABARAP	H6UMI1	98 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582		I3L1I5	382 aa	Predicted RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	GMFG	O60234	142 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	MT-ND5	P03915	603 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	C8G	P07360	202 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	UQCRC2	P22695	453 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	EEF1A1	P68104	462 aa	Known RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	DEFB103A	P81534	67 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR7A5	Q15622	319 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	MAPK14	Q16539	360 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	UBE2NL	Q5JXB2	153 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms