RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 A6NNC1 897 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 TMEM229AB2RXF0 380 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 TPST2O60704 377 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 CTAG2O75638 210 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 AKR7A3O95154 331 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 LGI1O95970 557 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 CRYBA2P53672 197 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 POU4F3Q15319 338 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 OR1Q1Q15612 314 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 TSC22D1Q15714 1073 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 INTS11Q5TA45 600 aaKnown RBP12.41□□□□□ -0.42
DDX41-212ENST00000511040 C1orf140Q5VVS0 124 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 RBM45Q8IUH3 476 aaKnown RBP12.41□□□□□ -0.42
DDX41-212ENST00000511040 BHLHE22Q8NFJ8 381 aaPredicted RBP12.41□□□□□ -0.42
DDX41-212ENST00000511040 OR4D11Q8NGI4 311 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 PIGXQ8TBF5 258 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 NRGNQ92686 78 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 ARHGDIGQ99819 225 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 NAA11Q9BSU3 229 aaPredicted RBP12.41□□□□□ -0.42
DDX41-212ENST00000511040 MED18Q9BUE0 208 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 POTEKPQ9BYX7 375 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 TRIM2Q9C040 744 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 GP6Q9HCN6 339 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 TESQ9UGI8 421 aaKnown RBP12.41□□□□□ -0.42
DDX41-212ENST00000511040 NDRG3Q9UGV2 375 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 PRSS50Q9UI38 385 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 APCP25054 2843 aa12.41□□□□□ -0.42
DDX41-212ENST00000511040 ZNF716A6NP11 495 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 ZNF724A8MTY0 619 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 FAM220BPB1ANY3 271 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 DNPH1O43598 174 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 AHSA1O95433 338 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 IGHV3-9P01782 118 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 GPIP06744 558 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 TNFRSF1BP20333 461 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 RPS5P46782 204 aaKnown RBP12.4□□□□□ -0.42
DDX41-212ENST00000511040 NUDT2P50583 147 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 MAP2K6P52564 334 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 DAZAP2Q15038 168 aaPredicted RBP12.4□□□□□ -0.42
DDX41-212ENST00000511040 NPTX1Q15818 432 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 ALG10BQ5I7T1 473 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 OTUD3Q5T2D3 398 aaPredicted RBP12.4□□□□□ -0.42
DDX41-212ENST00000511040 FBXW10Q5XX13 1052 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 STAC2Q6ZMT1 411 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 BEND4Q6ZU67 534 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 C22orf34Q6ZV56 151 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 CCDC80Q76M96 950 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 GALNT5Q7Z7M9 940 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 RANBP3LQ86VV4 465 aaPredicted RBP12.4□□□□□ -0.42
DDX41-212ENST00000511040 CXorf67Q86X51 503 aaPredicted RBP12.4□□□□□ -0.42
DDX41-212ENST00000511040 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 ZNF100Q8IYN0 542 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 TMEM99Q8N816 258 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 LSMEM1Q8N8F7 131 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 OR2T12Q8NG77 320 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 OR6T1Q8NGN1 323 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 SLC25A36Q96CQ1 311 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 KTI12Q96EK9 354 aaPredicted RBP12.4□□□□□ -0.42
DDX41-212ENST00000511040 DACH2Q96NX9 599 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 MCHR1Q99705 422 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 TACO1Q9BSH4 297 aaKnown RBP12.4□□□□□ -0.42
DDX41-212ENST00000511040 TAPBPLQ9BX59 468 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 POLDIP3Q9BY77 421 aaKnown RBP12.4□□□□□ -0.42
DDX41-212ENST00000511040 EFCAB1Q9HAE3 211 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 TMEM27Q9HBJ8 222 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 SELENONQ9NZV5 590 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 EMC3Q9P0I2 261 aa12.4□□□□□ -0.42
DDX41-212ENST00000511040 C6orf203Q9P0P8 240 aaPredicted RBP12.4□□□□□ -0.42
DDX41-212ENST00000511040 FREM1Q5H8C1 2179 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 IGKV1D-42A0A075B6H8 117 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 IGKV3D-15A0A087WSY6 115 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 CPSF4LA6NMK7 179 aaKnown RBP12.39□□□□□ -0.43
DDX41-212ENST00000511040 CASKO14936 926 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 EIF1BO60739 113 aaKnown RBP12.39□□□□□ -0.43
DDX41-212ENST00000511040 NPIPB7O75200 414 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 ADAP00813 363 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 CBLP22681 906 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 NTF4P34130 210 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 OR3A2P47893 321 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 SLC7A2P52569 658 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 CDH12P55289 794 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 H3F3AP84243 136 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 EGR4Q05215 589 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 LIPEQ05469 1076 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 PDK3Q15120 406 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 NRF1Q16656 503 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 LRRC23Q53EV4 343 aaPredicted RBP12.39□□□□□ -0.43
DDX41-212ENST00000511040 ALKBH2Q6NS38 261 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 ERICH5Q6P6B1 374 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 ULK3Q6PHR2 472 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 PAQR6Q6TCH4 344 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 C6orf89Q6UWU4 347 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 PIGWQ7Z7B1 504 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 MICU2Q8IYU8 434 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 STK35Q8TDR2 534 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 DNAJA4Q8WW22 397 aaPredicted RBP12.39□□□□□ -0.43
DDX41-212ENST00000511040 CMTM5Q96DZ9 223 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 PTDSS2Q9BVG9 487 aa12.39□□□□□ -0.43
DDX41-212ENST00000511040 CLEC4MQ9H2X3 399 aaPredicted RBP12.39□□□□□ -0.43
DDX41-212ENST00000511040 RASSF1Q9NS23 344 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms