RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 POMGNT2Q8NAT1 580 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 SLC37A3Q8NCC5 494 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 FBXO36Q8NEA4 188 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 IPMKQ8NFU5 416 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 OR56A4Q8NGH8 313 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 OR52K1Q8NGK4 314 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 C11orf45Q8TAV5 145 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 GANCQ8TET4 914 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 KLK6Q92876 244 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 GLYATL1Q969I3 302 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 AP2M1Q96CW1 435 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 CDKN2AIPNLQ96HQ2 116 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 C9orf72Q96LT7 481 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 FOXN4Q96NZ1 517 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 MAP3K3Q99759 626 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 OVOL2Q9BRP0 275 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 TIMM29Q9BSF4 260 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 FICDQ9BVA6 458 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 TCEAL2Q9H3H9 227 aaPredicted RBP3.32□□□□□ -1.88
NFKB1-208ENST00000509165 DNAJC4Q9NNZ3 241 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 B3GAT2Q9NPZ5 323 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 PHPT1Q9NRX4 125 aaPredicted RBP3.32□□□□□ -1.88
NFKB1-208ENST00000509165 NLGN3Q9NZ94 848 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 PKD2L2Q9NZM6 624 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 SEPT10Q9P0V9 454 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 OR1A2Q9Y585 309 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 ARL5AQ9Y689 179 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 CACNA1CQ13936 2221 aa3.32□□□□□ -1.88
NFKB1-208ENST00000509165 PCM1Q15154 2024 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 GLYATL1P3A0A0U1RQE8 302 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 EXOC1LA0A1B0GW35 172 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 TRBC2A0A5B9 178 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 HEATR9A2RTY3 570 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 FAM47DPA6NHR8 397 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 AQP9O43315 295 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 DUX1O43812 170 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 SRSF10O75494 262 aaKnown RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 ATP6AP2O75787 350 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 SRP72O76094 671 aaKnown RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 WISP3O95389 354 aaPredicted RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 GP1BAP07359 652 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 LIPCP11150 499 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 RPL35AP18077 110 aaKnown RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 CD9P21926 228 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 RPS3P23396 243 aaKnown RBP eCLIP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 OAS2P29728 719 aaKnown RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 SPAM1P38567 509 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 ARRB1P49407 418 aaPredicted RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 PRLHRP49683 370 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 SERPINB9P50453 376 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 C21orf59P57076 290 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 UBE2IP63279 158 aaKnown RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 GABPB1Q06547 395 aaPredicted RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 ITIH4Q14624 930 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 TAB1Q15750 504 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 CHRNA6Q15825 494 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 ZNF239Q16600 458 aaKnown RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 CLPPQ16740 277 aaPredicted RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 KCTD19Q17RG1 926 aaPredicted RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 KBTBD12Q3ZCT8 623 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 ANKRD20A4Q4UJ75 823 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 LACTB2Q53H82 288 aaPredicted RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 LDLRAP1Q5SW96 308 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 GPRC6AQ5T6X5 926 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 GPR139Q6DWJ6 353 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 SUSD1Q6UWL2 747 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 ABRAXAS1Q6UWZ7 409 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 FRRS1Q6ZNA5 592 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 RBPMS2Q6ZRY4 209 aaKnown RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 CHMP1BQ7LBR1 199 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 GLT6D1Q7Z4J2 308 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 SNX20Q7Z614 316 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 LCA5Q86VQ0 697 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 SLC26A11Q86WA9 606 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 CNTN4Q8IWV2 1026 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 SFRP1Q8N474 314 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 ARL14Q8N4G2 192 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 RASGEF1AQ8N9B8 481 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 DNAAF3Q8N9W5 541 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 OR7A2PQ8NGA2 310 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 OR4K2Q8NGD2 314 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 OR13C4Q8NGS5 318 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 CCL4L1Q8NHW4 92 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 WDR36Q8NI36 951 aaKnown RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 ACMSDQ8TDX5 336 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 DCAKDQ8WVC6 231 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 RASL10AQ92737 203 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 CDKL2Q92772 493 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 DNAJC1Q96KC8 554 aaKnown RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 BIRC8Q96P09 236 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 OR2M4Q96R27 311 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 SMR3AQ99954 134 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 APOL2Q9BQE5 337 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 NUDT16L1Q9BRJ7 211 aaKnown RBP3.31□□□□□ -1.88
NFKB1-208ENST00000509165 VPS37BQ9H9H4 285 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 UCK1Q9HA47 277 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 CHRAC1Q9NRG0 131 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 NDE1Q9NXR1 346 aa3.31□□□□□ -1.88
NFKB1-208ENST00000509165 PSMC3IPQ9P2W1 217 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms