RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 C8BP07358 591 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 ATP6V1B2P21281 511 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 TACR3P29371 465 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 NTF4P34130 210 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 MSX2P35548 267 aaPredicted RBP7.72□□□□□ -1.17
SNCA-211ENST00000508895 SLC1A3P43003 542 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 RAC1P63000 192 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 CBX1P83916 185 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 BNIP1Q12981 228 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 TSC22D1Q15714 1073 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 TMEM176BQ3YBM2 270 aaPredicted RBP7.72□□□□□ -1.17
SNCA-211ENST00000508895 HBMQ6B0K9 141 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 WBP2NLQ6ICG8 309 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.72□□□□□ -1.17
SNCA-211ENST00000508895 P4HA3Q7Z4N8 544 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 VTCN1Q7Z7D3 282 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 ATG4DQ86TL0 474 aaPredicted RBP7.72□□□□□ -1.17
SNCA-211ENST00000508895 CDH24Q86UP0 819 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 CDC20BQ86Y33 519 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 RBM45Q8IUH3 476 aaKnown RBP7.72□□□□□ -1.17
SNCA-211ENST00000508895 CADM2Q8N3J6 435 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 FAM86B1Q8N7N1 296 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 VANGL1Q8TAA9 524 aaPredicted RBP7.72□□□□□ -1.17
SNCA-211ENST00000508895 ABHD3Q8WU67 409 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 RASSF5Q8WWW0 418 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 ZNF775Q96BV0 537 aaPredicted RBP7.72□□□□□ -1.17
SNCA-211ENST00000508895 POM121Q96HA1 1249 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 CLPTM1LQ96KA5 538 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 KLHL15Q96M94 604 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 WFIKKN1Q96NZ8 548 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 PRR14Q9BWN1 585 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 PCDHAC1Q9H158 963 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 ARMC7Q9H6L4 198 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 RASSF1Q9NS23 344 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 CHRNA9Q9UGM1 479 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 OSGIN1Q9UJX0 560 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 ZNF175Q9Y473 711 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 USF3Q68DE3 2245 aa7.72□□□□□ -1.17
SNCA-211ENST00000508895 HEATR1Q9H583 2144 aaKnown RBP7.72□□□□□ -1.17
SNCA-211ENST00000508895 VPS13CQ709C8 3753 aa7.71□□□□□ -1.17
SNCA-211ENST00000508895 MAP1AP78559 2803 aaPredicted RBP7.71□□□□□ -1.17
SNCA-211ENST00000508895 TMED7-TICAM2A0A0A6YYA0 188 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 A0A0B4J2E0 115 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 A0A1B0GWA3 101 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 A0A1B0GX12 115 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 TMEM72A0PK05 275 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 ZC3H12DA2A288 527 aaKnown RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 DEFB108AA8MXU0 73 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 GSTA4O15217 222 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 SS18L1O75177 396 aaPredicted RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 LYPD3O95274 346 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 SERPINA1P01009 418 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 HRGP04196 525 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 UQCRBP14927 111 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 ME2P23368 584 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 DNAJA1P31689 397 aaKnown RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 APOBEC1P41238 236 aaKnown RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 POLR2HP52434 150 aaKnown RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 IST1P53990 364 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 NCALDP61601 193 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 DAZAP2Q15038 168 aaPredicted RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 ZNF239Q16600 458 aaKnown RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 SPATS1Q496A3 300 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 SYT14P1Q58G82 188 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 PPP4R4Q6NUP7 873 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 ESPNLQ6ZVH7 1005 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 CBLL1Q75N03 491 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 RANBP3LQ86VV4 465 aaPredicted RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 TMEM200AQ86VY9 491 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 CARM1Q86X55 608 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 ADGRG3Q86Y34 549 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 ARHGAP24Q8N264 748 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 LSMEM1Q8N8F7 131 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 SLC26A7Q8TE54 656 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 SLC25A43Q8WUT9 341 aaPredicted RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 FAM162AQ96A26 154 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 CCDC124Q96CT7 223 aaKnown RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 TPD52L3Q96J77 140 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 HSH2DQ96JZ2 352 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 ARL5BQ96KC2 179 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 HS3ST6Q96QI5 342 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 ZNF300Q96RE9 604 aaPredicted RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 OR11A1Q9GZK7 315 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 ADAM19Q9H013 955 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 PLEKHF2Q9H8W4 249 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 KLHL28Q9NXS3 571 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 C6orf203Q9P0P8 240 aaPredicted RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 MAGEL2Q9UJ55 1249 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 SLC13A4Q9UKG4 626 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 BAG5Q9UL15 447 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 PRPF19Q9UMS4 504 aaKnown RBP7.71□□□□□ -1.18
SNCA-211ENST00000508895 TMED7Q9Y3B3 224 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 TESMINQ9Y4I5 508 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 SNX13Q9Y5W8 968 aa7.71□□□□□ -1.18
SNCA-211ENST00000508895 PLCE1Q9P212 2302 aa7.7□□□□□ -1.18
SNCA-211ENST00000508895 IGKV1D-42A0A075B6H8 117 aa7.7□□□□□ -1.18
SNCA-211ENST00000508895 TUBAL3A6NHL2 446 aa7.7□□□□□ -1.18
SNCA-211ENST00000508895 CPSF4LA6NMK7 179 aaKnown RBP7.7□□□□□ -1.18
SNCA-211ENST00000508895 MSTNO14793 375 aa7.7□□□□□ -1.18
SNCA-211ENST00000508895 SMAD9O15198 467 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms