RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 CYP51A1Q16850 503 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 PGS1Q32NB8 556 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 CYP27C1Q4G0S4 372 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 ESCO2Q56NI9 601 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.28□□□□□ -1.24
SCN1A-207ENST00000507401 BICRALQ6AI39 1079 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 FAM180BQ6P0A1 224 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 SCIMPQ6UWF3 145 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 ANGPTL8Q6UXH0 198 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 KRT73Q86Y46 540 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 UBQLNLQ8IYU4 475 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 PRR22Q8IZ63 422 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 TCTE3Q8IZS6 198 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 FAM9CQ8IZT9 166 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 RNF148Q8N7C7 305 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 WDSUB1Q8N9V3 476 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 CHDHQ8NE62 594 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-207ENST00000507401 OR9A2Q8NGT5 310 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 ZPLD1Q8TCW7 415 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 MAGEE2Q8TD90 523 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-207ENST00000507401 ZFP90Q8TF47 636 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 RNF138Q8WVD3 245 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 KAT2AQ92830 837 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 RPL3LQ92901 407 aaKnown RBP7.28□□□□□ -1.24
SCN1A-207ENST00000507401 ZHX1-C8orf76Q96EF9 292 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 ZNF764Q96H86 408 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-207ENST00000507401 NSMCE2Q96MF7 247 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 BBS4Q96RK4 519 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 KRTAP9-2Q9BYQ4 174 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 SLIRPQ9GZT3 109 aaKnown RBP7.28□□□□□ -1.24
SCN1A-207ENST00000507401 NAA50Q9GZZ1 169 aaKnown RBP7.28□□□□□ -1.24
SCN1A-207ENST00000507401 SLC6A15Q9H2J7 730 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 DUSP21Q9H596 190 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 MAGIXQ9H6Y5 334 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 CALHM2Q9HA72 323 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 DDX28Q9NUL7 540 aaKnown RBP7.28□□□□□ -1.24
SCN1A-207ENST00000507401 C1orf109Q9NX04 203 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 B3GNT2Q9NY97 397 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 C19orf53Q9UNZ5 99 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-207ENST00000507401 SPEF1Q9Y4P9 236 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 N6AMT1Q9Y5N5 214 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 CSMD1Q96PZ7 3565 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 OTOGQ6ZRI0 2925 aa7.28□□□□□ -1.24
SCN1A-207ENST00000507401 A0A075B6Q4 140 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 A0A1W2PP18 115 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 TCRBV5S2A0A599 114 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 PRAMEF25A6NGN4 478 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 FAM25EA8MYX2 175 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 SLC1A7O00341 560 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 AZIN1O14977 448 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 ERN1O75460 977 aaKnown RBP7.27□□□□□ -1.25
SCN1A-207ENST00000507401 LRATO95237 230 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 OR3A3P47888 321 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 NCBP2P52298 156 aaKnown RBP eCLIP7.27□□□□□ -1.252e-9■□□□□ 10.6
SCN1A-207ENST00000507401 OR2B6P58173 313 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 EEF1A1P68104 462 aaKnown RBP7.27□□□□□ -1.25
SCN1A-207ENST00000507401 PPP2R2BQ00005 443 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 PSG6Q00889 435 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 TLE4Q04727 773 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 AQP6Q13520 282 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 NNATQ16517 81 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 FBXL19-AS1Q494R0 122 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 ACSF3Q4G176 576 aaPredicted RBP7.27□□□□□ -1.25
SCN1A-207ENST00000507401 CCDC58Q4VC31 144 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 YIF1BQ5BJH7 314 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 EEF1A1P5Q5VTE0 462 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 UBE2UQ5VVX9 321 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 FAM219BQ5XKK7 198 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 NSUN5P2Q63ZY6 315 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 CCBE1Q6UXH8 406 aaPredicted RBP7.27□□□□□ -1.25
SCN1A-207ENST00000507401 CYP2R1Q6VVX0 501 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 Q6ZSR9 355 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 SEM1Q6ZVN7 128 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 RFPL4BQ6ZWI9 263 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 LARP4Q71RC2 724 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCN1A-207ENST00000507401 WFDC8Q8IUA0 241 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 OR2L13Q8N349 312 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 DPP10Q8N608 796 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 IL17RDQ8NFM7 739 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 OR7G2Q8NG99 324 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 GIMAP1Q8WWP7 306 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 TMBIM1Q969X1 311 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 LRRC58Q96CX6 371 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 LGALS12Q96DT0 336 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 MTERF3Q96E29 417 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 ELP4Q96EB1 424 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 LRRC46Q96FV0 321 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 WDYHV1Q96HA8 205 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 FCRL1Q96LA6 429 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 AMDHD1Q96NU7 426 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 MUS81Q96NY9 551 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 ADOQ96SZ5 270 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 SLC39A3Q9BRY0 314 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 EBPLQ9BY08 206 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 GLIPR2Q9H4G4 154 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 GORASP2Q9H8Y8 452 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 ZNF556Q9HAH1 456 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 LIN7BQ9HAP6 207 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 FOLH1BQ9HBA9 442 aa7.27□□□□□ -1.25
SCN1A-207ENST00000507401 C3orf14Q9HBI5 128 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms