RNA–Protein interactions for RNA: ENST00000506847.5

SNX2-204, Transcript of sorting nexin 2, humanhuman

TSL 5

Gene SNX2, Length 798 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-204ENST00000506847 TM2D1Q9BX74 207 aa3.31□□□□□ -1.88
SNX2-204ENST00000506847 CCSER1Q9C0I3 900 aa3.31□□□□□ -1.88
SNX2-204ENST00000506847 SMYD3Q9H7B4 428 aa3.31□□□□□ -1.88
SNX2-204ENST00000506847 ISG20L2Q9H9L3 353 aaKnown RBP3.31□□□□□ -1.88
SNX2-204ENST00000506847 PARVGQ9HBI0 331 aa3.31□□□□□ -1.88
SNX2-204ENST00000506847 HEBP1Q9NRV9 189 aa3.31□□□□□ -1.88
SNX2-204ENST00000506847 DUS2Q9NX74 493 aaKnown RBP3.31□□□□□ -1.88
SNX2-204ENST00000506847 NDRG2Q9UN36 371 aaKnown RBP3.31□□□□□ -1.88
SNX2-204ENST00000506847 DUSP12Q9UNI6 340 aa3.31□□□□□ -1.88
SNX2-204ENST00000506847 CCL26Q9Y258 94 aa3.31□□□□□ -1.88
SNX2-204ENST00000506847 CACNA1HO95180 2353 aa3.31□□□□□ -1.88
SNX2-204ENST00000506847 KIF26AQ9ULI4 1882 aaPredicted RBP3.3□□□□□ -1.88
SNX2-204ENST00000506847 TRIOO75962 3097 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 MYBPHLA2RUH7 354 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 LAD1O00515 517 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 PIRO00625 290 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 POLR2DO15514 142 aaKnown RBP3.3□□□□□ -1.88
SNX2-204ENST00000506847 CLTAP09496 248 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 CYP2F1P24903 491 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 OR3A4PP47883 348 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 SRP54P61011 504 aaKnown RBP3.3□□□□□ -1.88
SNX2-204ENST00000506847 GTF2BQ00403 316 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 NCBP1Q09161 790 aaKnown RBP3.3□□□□□ -1.88
SNX2-204ENST00000506847 C17orf67Q0P5P2 114 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 EIF4EBP2Q13542 120 aaPredicted RBP3.3□□□□□ -1.88
SNX2-204ENST00000506847 IL23RQ5VWK5 629 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 SLC8B1Q6J4K2 584 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 LEG1Q6P5S2 330 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 ZNF720Q7Z2F6 126 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 TMEM150AQ86TG1 271 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 PDCL2Q8N4E4 241 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 TMEM185AQ8NFB2 350 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 WDR36Q8NI36 951 aaKnown RBP3.3□□□□□ -1.88
SNX2-204ENST00000506847 SCFD1Q8WVM8 642 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 KRT35Q92764 455 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 MYLPFQ96A32 169 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 TADA1Q96BN2 335 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 CCDC127Q96BQ5 260 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 PKMYT1Q99640 499 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 COQ7Q99807 217 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 RAB34Q9BZG1 259 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 Q9H3A6 140 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 MFSD1Q9H3U5 465 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 AGPAT3Q9NRZ7 376 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 RBAKQ9NYW8 714 aaPredicted RBP3.3□□□□□ -1.88
SNX2-204ENST00000506847 EPS15L1Q9UBC2 864 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 ODF2LQ9ULJ1 636 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 UBQLN1Q9UMX0 589 aaKnown RBP3.3□□□□□ -1.88
SNX2-204ENST00000506847 KIF3AQ9Y496 699 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 TCHHQ07283 1943 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 MTCL1Q9Y4B5 1905 aaKnown RBP3.3□□□□□ -1.88
SNX2-204ENST00000506847 OBSL1O75147 1896 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 PATJQ8NI35 1801 aa3.3□□□□□ -1.88
SNX2-204ENST00000506847 ZFHX2Q9C0A1 2572 aaPredicted RBP3.29□□□□□ -1.88
SNX2-204ENST00000506847 FAM231BA6NCW3 169 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 FBLL1A6NHQ2 334 aaKnown RBP3.29□□□□□ -1.88
SNX2-204ENST00000506847 LRRIQ3A6PVS8 624 aaPredicted RBP3.29□□□□□ -1.88
SNX2-204ENST00000506847 EMC8O43402 210 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 PROS1P07225 676 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 CCDC130P13994 396 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 HMGA1P17096 107 aaKnown RBP3.29□□□□□ -1.88
SNX2-204ENST00000506847 GABRR2P28476 465 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 GDI1P31150 447 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 NDUFA8P51970 172 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 ZNF133P52736 654 aaPredicted RBP3.29□□□□□ -1.88
SNX2-204ENST00000506847 MYL6P60660 151 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 MYBPC1Q00872 1141 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 OC90Q02509 493 aaPredicted RBP3.29□□□□□ -1.88
SNX2-204ENST00000506847 CYP24A1Q07973 514 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 PNOCQ13519 176 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 PON2Q15165 354 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 ANGPT1Q15389 498 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 AGKQ53H12 422 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 C1orf220Q5T0J3 134 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 DCST2Q5T1A1 773 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 RESP18Q5W5W9 173 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 CENPPQ6IPU0 288 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 NET1Q7Z628 596 aaPredicted RBP3.29□□□□□ -1.88
SNX2-204ENST00000506847 TMEM179BQ7Z7N9 219 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 CNTN4Q8IWV2 1026 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 BATF2Q8N1L9 274 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 CSGALNACT2Q8N6G5 542 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 CSNK1A1LQ8N752 337 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 PAGE5Q96GU1 130 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 CYP2S1Q96SQ9 504 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 FAM49BQ9NUQ9 324 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 GALPQ9UBC7 116 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 GHRLQ9UBU3 117 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 EXOSC1Q9Y3B2 195 aaKnown RBP3.29□□□□□ -1.88
SNX2-204ENST00000506847 DMDP11532 3685 aa3.29□□□□□ -1.88
SNX2-204ENST00000506847 WDFY4Q6ZS81 3184 aa3.28□□□□□ -1.88
SNX2-204ENST00000506847 TMEM89A2RUT3 159 aa3.28□□□□□ -1.88
SNX2-204ENST00000506847 PINLYPA6NC86 204 aa3.28□□□□□ -1.88
SNX2-204ENST00000506847 YEATS4O95619 227 aa3.28□□□□□ -1.88
SNX2-204ENST00000506847 NR2C1P13056 603 aa3.28□□□□□ -1.88
SNX2-204ENST00000506847 CCNE1P24864 410 aa3.28□□□□□ -1.88
SNX2-204ENST00000506847 PTBP1P26599 531 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNX2-204ENST00000506847 CSTF1Q05048 431 aaKnown RBP3.28□□□□□ -1.88
SNX2-204ENST00000506847 KDSRQ06136 332 aa3.28□□□□□ -1.88
SNX2-204ENST00000506847 ACTN3Q08043 901 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms