RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 OR51S1Q8NGJ8 323 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 TRMT10AQ8TBZ6 339 aaKnown RBP2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 IL22RA2Q969J5 263 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 FAM104AQ969W3 186 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 EFHD2Q96C19 240 aaPredicted RBP2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 PAGE5Q96GU1 130 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 SEC22AQ96IW7 307 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 KCNA7Q96RP8 456 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 RASL11BQ9BPW5 248 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 HOXC10Q9NYD6 342 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 PIPOXQ9P0Z9 390 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 PRG3Q9Y2Y8 225 aaPredicted RBP2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 ATP6V0A2Q9Y487 856 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 SLCO1B1Q9Y6L6 691 aa2.61□□□□□ -1.99
TOPBP1-204ENST00000505804 ARPC3O15145 178 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 RGS16O15492 202 aaPredicted RBP2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 TNFSF13O75888 250 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 PTMAP06454 111 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 GIPP09681 153 aaPredicted RBP2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 ZNF853P0CG23 659 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 TOP1P11387 765 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 RCC1P18754 421 aaPredicted RBP2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 NPR2P20594 1047 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 HMGB2P26583 209 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 OTX2P32243 289 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 SHMT2P34897 504 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 RFC4P35249 363 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 KPNA2P52292 529 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 PKNOX1P55347 436 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 TAS2R19P59542 299 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 MAP2K1Q02750 393 aaPredicted RBP2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 SLC15A2Q16348 729 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 NRF1Q16656 503 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 OR2G6Q5TZ20 316 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 TIGD3Q6B0B8 471 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 PRSS41Q7RTY9 318 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 RALGPS2Q86X27 583 aaPredicted RBP2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 CCDC50Q8IVM0 306 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 CCDC65Q8IXS2 484 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 SLC35F2Q8IXU6 374 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 RDH10Q8IZV5 341 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 FAM71E2Q8N5Q1 922 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 TEX9Q8N6V9 391 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 Q8N9L7 120 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 GMCL1P1Q8NEA9 526 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 MAIP1Q8WWC4 291 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 PIGCQ92535 297 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 SECISBP2Q96T21 854 aaKnown RBP2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 NAT9Q9BTE0 207 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 C20orf85Q9H1P6 137 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 LRRN3Q9H3W5 708 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 PLGRKTQ9HBL7 147 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 ZNF225Q9UK10 706 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 BLOC1S6Q9UL45 172 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 NACAE9PAV3 2078 aa2.6□□□□□ -1.99
TOPBP1-204ENST00000505804 A0A0G2JLM5 398 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 A6NDX4 124 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 F5H6K3 240 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 UGT1A9O60656 530 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 AP2A1O95782 977 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 CHTF8P0CG12 524 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 CCDC130P13994 396 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 CCNCP24863 283 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 KIR2DS4P43632 304 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 KLRC3Q07444 240 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 GANABQ14697 944 aaKnown RBP2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 CYB5R2Q6BCY4 276 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 Q6P435 159 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 VSTM4Q8IW00 320 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 ENTHD1Q8IYW4 607 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 ARIH2OSQ8N7S6 290 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 Q8N9W7 124 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 OR10G3Q8NGC4 313 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 ARPC1AQ92747 370 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 CMTM7Q96FZ5 175 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 P2RY13Q9BPV8 354 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 NRIP2Q9BQI9 281 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 MRPL45Q9BRJ2 306 aaKnown RBP2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 RAB34Q9BZG1 259 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 REEP4Q9H6H4 257 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 SMPD3Q9NY59 655 aaPredicted RBP2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 EPS15L1Q9UBC2 864 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 COPS3Q9UNS2 423 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 POLDIP2Q9Y2S7 368 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 TIMM10BQ9Y5J6 103 aa2.59□□□□□ -1.99
TOPBP1-204ENST00000505804 PNPLA6Q8IY17 1366 aa2.59□□□□□ -2
TOPBP1-204ENST00000505804 ATP10AO60312 1499 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 TRBV6-6A0A0A6YYG2 114 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 FAM166BA8MTA8 275 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 E9PBE3 544 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 KRTAP4-16G5E9R7 235 aaPredicted RBP2.58□□□□□ -2
TOPBP1-204ENST00000505804 ATP5LO75964 103 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 MOSP00540 346 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 PCMT1P22061 227 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 RDXP35241 583 aaKnown RBP2.58□□□□□ -2
TOPBP1-204ENST00000505804 DDOSTP39656 456 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 MAP3K8P41279 467 aa2.58□□□□□ -2
TOPBP1-204ENST00000505804 VDAC2P45880 294 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms