RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CD14P08571 375 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 CELP19835 753 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 P2RX1P51575 399 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 SLC16A1P53985 500 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 SUMO3P55854 103 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 GPR139Q6DWJ6 353 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 APOOLQ6UXV4 268 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 OR5L2Q8NGL0 311 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 CCDC74BQ96LY2 380 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 HCAR1Q9BXC0 346 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 MED20Q9H944 212 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 TOR4AQ9NXH8 423 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 NXT1Q9UKK6 140 aaKnown RBP15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 MOKQ9UQ07 419 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 CMAHPQ9Y471 501 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 MCIDASD6RGH6 385 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 HCRTR2O43614 444 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 PLPP2O43688 288 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 HIST1H2ABP04908 130 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 ASAH2BP0C7U1 165 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 SPTBP11277 2137 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 GP1BBP13224 206 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 HIST1H1CP16403 213 aaKnown RBP15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 EFNA3P52797 238 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 RNF4P78317 190 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 FABP5Q01469 135 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 ZNF117Q03924 483 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 CSTF1Q05048 431 aaKnown RBP15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 HIST3H2AQ7L7L0 130 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 KLBQ86Z14 1044 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 C1orf210Q8IVY1 113 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 TMEM99Q8N816 258 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 GATSQ8NAP1 163 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 MAFAQ8NHW3 353 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 HIST1H2ACQ93077 130 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 ABTB1Q969K4 478 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 NMNAT2Q9BZQ4 307 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 CPNE5Q9HCH3 593 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 PRDM6Q9NQX0 595 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 FBXO4Q9UKT5 387 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 CACNA1EQ15878 2313 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 IDSB3KWA1 339 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 RNF13O43567 381 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 CFIP05156 583 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 SYPP08247 313 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 FGF5P12034 268 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 CXCR1P25024 350 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 TACR3P29371 465 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 EVI2BP34910 448 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 DIO1P49895 249 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 CDC20Q12834 499 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 CBLN3Q6UW01 205 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 PAMR1Q6UXH9 720 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 TMPRSS9Q7Z410 1059 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 OR6S1Q8NH40 331 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 KIAA1143Q96AT1 154 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 BARHL1Q9BZE3 327 aa15.76■□□□□ 0.11
TRAPPC11-204ENST00000505676 hCG_2014768A0A024R1R8 64 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 TRAV36DV7A0A075B6V5 113 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 GABRPO00591 440 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 FADS1O60427 444 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 PTTG1O95997 202 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 TGM1P22735 817 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 POLR2HP52434 150 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 DDI2Q5TDH0 399 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 ZNF385CQ66K41 422 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 JAZF1Q86VZ6 243 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 LYSMD2Q8IV50 215 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 MS4A15Q8N5U1 240 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 TMEM234Q8WY98 164 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 TMEM203Q969S6 136 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 DDOQ99489 341 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 KCNS3Q9BQ31 491 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 GNB5O14775 395 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 OIP5O43482 229 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 LALBAP00709 142 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 SERPINA3P01011 423 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 PTBP1P26599 531 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 SDHAP31040 664 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 UQCRC1P31930 480 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 MTNR1BP49286 362 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 EMP2P54851 167 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 MRPL28Q13084 256 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 ALG10Q5BKT4 473 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 VASH1Q7L8A9 365 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 NANOGNBQ7Z5D8 188 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 PRSS58Q8IYP2 241 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 EID2Q8N6I1 236 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 C10orf53Q8N6V4 93 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 LRRC75AQ8NAA5 344 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 NPEPL1Q8NDH3 523 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 NFAM1Q8NET5 270 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 OR4K13Q8NH42 304 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 SETD6Q8TBK2 473 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 IFI44Q8TCB0 444 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 ACOT12Q8WYK0 555 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 TMCO6Q96DC7 493 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 GFM1Q96RP9 751 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 MNTQ99583 582 aa15.75■□□□□ 0.11
TRAPPC11-204ENST00000505676 LPAR4Q99677 370 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms