RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 GTF2H4Q92759 462 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 MAL2Q969L2 176 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 TACO1Q9BSH4 297 aaKnown RBP11.55□□□□□ -0.56
DDX41-204ENST00000504807 ADAM19Q9H013 955 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 MTHFD2LQ9H903 347 aaPredicted RBP11.55□□□□□ -0.56
DDX41-204ENST00000504807 TPT1P8Q9HAU6 139 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 GDF2Q9UK05 429 aaPredicted RBP11.55□□□□□ -0.56
DDX41-204ENST00000504807 LIPT1Q9Y234 373 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 HDGFL3Q9Y3E1 203 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 FLVCR1Q9Y5Y0 555 aa11.55□□□□□ -0.56
DDX41-204ENST00000504807 OR5H1A6NKK0 313 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 FAAHO00519 579 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 IGHV4-39P01824 125 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 CD3EP07766 207 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 ZCCHC18P0CG32 403 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 IDO1P14902 403 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 SLC1A3P43003 542 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 POLR2HP52434 150 aaKnown RBP11.54□□□□□ -0.56
DDX41-204ENST00000504807 POLR2JP52435 117 aaKnown RBP11.54□□□□□ -0.56
DDX41-204ENST00000504807 ATP5J2P56134 94 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 CSNK2A1P68400 391 aaPredicted RBP11.54□□□□□ -0.56
DDX41-204ENST00000504807 HPCAP84074 193 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 SLC17A1Q14916 467 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 TTMPQ5BVD1 217 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 TSPO2Q5TGU0 170 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 SERPINA11Q86U17 422 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 CMIPQ8IY22 773 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 ZNF100Q8IYN0 542 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 TMEM99Q8N816 258 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 WDR31Q8NA23 367 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 OR52N5Q8NH56 324 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 OR52P1PQ8NH57 321 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 SMAP2Q8WU79 429 aaPredicted RBP11.54□□□□□ -0.56
DDX41-204ENST00000504807 TMEM19Q96HH6 336 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 ZNF385AQ96PM9 386 aaKnown RBP11.54□□□□□ -0.56
DDX41-204ENST00000504807 WFDC6Q9BQY6 131 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 C1QTNF6Q9BXI9 259 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 IKZF5Q9H5V7 419 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 SLC7A10Q9NS82 523 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 ZIM2Q9NZV7 527 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 TMEM181Q9P2C4 612 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 SEC14L4Q9UDX3 406 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 MALT1Q9UDY8 824 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 ZNF443Q9Y2A4 671 aaPredicted RBP11.54□□□□□ -0.56
DDX41-204ENST00000504807 NOSIPQ9Y314 301 aaKnown RBP11.54□□□□□ -0.56
DDX41-204ENST00000504807 PCDHB14Q9Y5E9 798 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 SLC25A15Q9Y619 301 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 USH1CQ9Y6N9 552 aa11.54□□□□□ -0.56
DDX41-204ENST00000504807 CFAP73A6NFT4 308 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 LIPT2A6NK58 231 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 A8MV72 311 aaPredicted RBP11.53□□□□□ -0.56
DDX41-204ENST00000504807 E7EQL1 145 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 ABCD4O14678 606 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 KLF11O14901 512 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 UBDO15205 165 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 ZNF208O43345 1280 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 AKR7A3O95154 331 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 IL6P05231 212 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 DBIP07108 87 aaKnown RBP11.53□□□□□ -0.56
DDX41-204ENST00000504807 IL7RP16871 459 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 GGT1P19440 569 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 CRATP43155 626 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 IDH3AP50213 366 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 ZNF83P51522 516 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 DSTNP60981 165 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 FAPQ12884 760 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 CEACAM7Q14002 265 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 VEZF1Q14119 521 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 GABRA6Q16445 453 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 TIMM23BQ5SRD1 257 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 ATG16L1Q676U5 607 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 DNM1P46Q6ZS02 220 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 LINGO2Q7L985 606 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 KIRREL3Q8IZU9 778 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 TRIML2Q8N7C3 387 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 GLB1L3Q8NCI6 653 aaPredicted RBP11.53□□□□□ -0.56
DDX41-204ENST00000504807 PIGXQ8TBF5 258 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 FBXW5Q969U6 566 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 APH1AQ96BI3 265 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 ZBTB18Q99592 522 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 TRAF4Q9BUZ4 470 aaPredicted RBP11.53□□□□□ -0.56
DDX41-204ENST00000504807 PRR14Q9BWN1 585 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 ESRP2Q9H6T0 727 aaKnown RBP11.53□□□□□ -0.56
DDX41-204ENST00000504807 TRAPPC4Q9Y296 219 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 CADP27708 2225 aa11.53□□□□□ -0.56
DDX41-204ENST00000504807 TMEM229AB2RXF0 380 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 NPIPB7O75200 414 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 ACVR1BP36896 505 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 RPS4XP62701 263 aaKnown RBP11.52□□□□□ -0.57
DDX41-204ENST00000504807 EGR4Q05215 589 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 RGNQ15493 299 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 OR7A5Q15622 319 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 GSTA3Q16772 222 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 GLIPR1L2Q4G1C9 344 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 PAGE3Q5JUK9 113 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 C11orf71Q6IPW1 123 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 CASP12Q6UXS9 341 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 CROCCP2Q86T23 111 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 WDFY1Q8IWB7 410 aa11.52□□□□□ -0.57
DDX41-204ENST00000504807 UBE2J2Q8N2K1 259 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms