RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 ZNF436Q9C0F3 470 aaPredicted RBP4.78□□□□□ -1.65
CLDND1-208ENST00000503004 TSPAN10Q9H1Z9 355 aaPredicted RBP4.78□□□□□ -1.65
CLDND1-208ENST00000503004 SEMA6CQ9H3T2 930 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 SFXN1Q9H9B4 322 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 TMEM74BQ9NUR3 256 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 TREM2Q9NZC2 230 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 GDE1Q9NZC3 331 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 VSX1Q9NZR4 365 aaPredicted RBP4.78□□□□□ -1.65
CLDND1-208ENST00000503004 SEC14L4Q9UDX3 406 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 ADAM29Q9UKF5 820 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 CMAHPQ9Y471 501 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 CHST2Q9Y4C5 530 aa4.78□□□□□ -1.65
CLDND1-208ENST00000503004 LOC105369274A0A096LPK9 316 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 OR2W5A6NFC9 320 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 MARCH11A6NNE9 402 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 INMT-MINDY4F8WBC2 141 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 SULT1C2O00338 296 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 PRICKLE3O43900 615 aaPredicted RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 SLC43A1O75387 559 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 LGI1O95970 557 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 LALBAP00709 142 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 EGFP01133 1207 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 MBP02144 154 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 APODP05090 189 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 CRYBA1P05813 215 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 HOXC4P09017 264 aaPredicted RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 PF4V1P10720 104 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 C5AR1P21730 350 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 PSMA1P25786 263 aaKnown RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 CD79BP40259 229 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 ETV5P41161 510 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 SLC1A3P43003 542 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 CRYBB2P43320 205 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 VEGFCP49767 419 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 AGFG1P52594 562 aaKnown RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 EPHA4P54764 986 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 TAS2R41P59536 307 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 HNRNPKP61978 463 aaKnown RBP eCLIP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 RPS21P63220 83 aaKnown RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 BTN3A2P78410 334 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 ZIC1Q15915 447 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 RPE65Q16518 533 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 ZNF311Q5JNZ3 666 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 ATAT1Q5SQI0 421 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 LCN1P1Q5VSP4 162 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 MRM1Q6IN84 353 aaKnown RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 SLC30A6Q6NXT4 461 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 SLC48A1Q6P1K1 146 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 FAM111BQ6SJ93 734 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 UNQ6494/PRO21346Q6UXR6 183 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 USP30Q70CQ3 517 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 HSD17B13Q7Z5P4 300 aaPredicted RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 TMEFF1Q8IYR6 380 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 OR4N4Q8N0Y3 316 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 Q8N402 240 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 ZFP41Q8N8Y5 198 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 SYT14Q8NB59 555 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 OR9Q1Q8NGQ5 310 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 OR2L8Q8NGY9 312 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 COQ8AQ8NI60 647 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 ZCCHC10Q8TBK6 192 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 TM9SF4Q92544 642 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 NKD1Q969G9 470 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 ZC3HAV1LQ96H79 300 aaKnown RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 TMEM41AQ96HV5 264 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 FAM46AQ96IP4 442 aaKnown RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 OR7D2Q96RA2 312 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 MYADMQ96S97 322 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 MARVELD1Q9BSK0 173 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 PBX4Q9BYU1 374 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 MED28Q9H204 178 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 SLC38A1Q9H2H9 487 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 MIXL1Q9H2W2 232 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 GAREM1Q9H706 876 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 NT5DC2Q9H857 520 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 C3orf14Q9HBI5 128 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 DHCR7Q9UBM7 475 aaKnown RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 NDOR1Q9UHB4 597 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 SLC17A4Q9Y2C5 497 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 RPL36Q9Y3U8 105 aaKnown RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 CACNA1IQ9P0X4 2223 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 CENPVL1A0A0U1RR11 272 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 FAM221AA4D161 298 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 SLC35F4A4IF30 521 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 ZNF860A6NHJ4 632 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 K7EQS6 105 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 LDLRAD4O15165 306 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 PROM1O43490 865 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 UBXN7O94888 489 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 IL33O95760 270 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 ADH1BP00325 375 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 HCKP08631 526 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 PIPP12273 146 aaPredicted RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 F3P13726 295 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 PTBP1P26599 531 aaKnown RBP eCLIP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 KIR2DL1P43626 348 aaPredicted RBP4.77□□□□□ -1.65
CLDND1-208ENST00000503004 KHKP50053 298 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 RORCP51449 518 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 PDX1P52945 283 aa4.77□□□□□ -1.65
CLDND1-208ENST00000503004 ADPRHP54922 357 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms