RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 LCKP06239 509 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 F7P08709 466 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 TSPAN19P0C672 248 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 GLI4P10075 376 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 SLC2A2P11168 524 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 NAT2P11245 290 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 EPXP11678 715 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 SAT1P21673 171 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 PRPH2P23942 346 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 FGF9P31371 208 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 FMO3P31513 532 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ADH7P40394 386 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 HSPA7P48741 367 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 CCT3P49368 545 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 CYB561P49447 251 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 C21orf58P58505 322 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 TAS2R50P59544 299 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 RPP38P78345 283 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 POU6F2P78424 691 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 TIAL1Q01085 375 aaKnown RBP eCLIP4.72□□□□□ -1.65
HTT-202ENST00000502820 CD83Q01151 205 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 DHODHQ02127 395 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 MAP4K2Q12851 820 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 CTBP1Q13363 440 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 TP53BP2Q13625 1128 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 TSTA3Q13630 321 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 GNA13Q14344 377 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ZNF273Q14593 569 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 LARS2Q15031 903 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 ZNF79Q15937 498 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 PRTGQ2VWP7 1150 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 TCTE1Q5JU00 501 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ZNF468Q5VIY5 522 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 YOD1Q5VVQ6 348 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 SAXO2Q658L1 398 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 PLAG1Q6DJT9 500 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ZNF425Q6IV72 752 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 LIN54Q6MZP7 749 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 TFAP2EQ6VUC0 442 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 LANCL3Q6ZV70 420 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 SULF2Q8IWU5 870 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 CCDC36Q8IYA8 594 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 LRRC56Q8IYG6 542 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 RNF113BQ8IZP6 322 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 LGI4Q8N135 537 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 CYP4Z2PQ8N1L4 340 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 STPG2Q8N412 459 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 LINC00471Q8N535 108 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 UXS1Q8NBZ7 420 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 CLRN3Q8NCR9 226 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 SRFBP1Q8NEF9 429 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 PROKR2Q8NFJ6 384 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 OR9A1PQ8NGU1 263 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 OR2T11Q8NH01 316 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 FBXO30Q8TB52 745 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 TMEM163Q8TC26 289 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 CD200R1Q8TD46 325 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ZNF431Q8TF32 576 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 UBASH3BQ8TF42 649 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ASB11Q8WXH4 323 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 SMPDL3AQ92484 453 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 PIGTQ969N2 578 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 PHF21BQ96EK2 531 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 C10orf90Q96M02 699 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 DMRTB1Q96MA1 342 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 FOPNLQ96NB1 174 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 SORCS2Q96PQ0 1159 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 FYTTD1Q96QD9 318 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 CPPED1Q9BRF8 314 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 CHCHD6Q9BRQ6 235 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 AARSD1Q9BTE6 412 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 THUMPD3Q9BV44 507 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 CNPPD1Q9BV87 410 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ASPNQ9BXN1 380 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ZNF436Q9C0F3 470 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 SHARPINQ9H0F6 387 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ZNF700Q9H0M5 742 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 C11orf54Q9H0W9 315 aaPredicted RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 TUBB1Q9H4B7 451 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ALG9Q9H6U8 611 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 PLEKHF2Q9H8W4 249 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 SYNPO2LQ9H987 977 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 PLSCR3Q9NRY6 295 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 ZNF224Q9NZL3 707 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 NDRG3Q9UGV2 375 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 NUFIP1Q9UHK0 495 aaKnown RBP4.72□□□□□ -1.65
HTT-202ENST00000502820 PFDN2Q9UHV9 154 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 SCP2D1Q9UJQ7 156 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 CDC42EP3Q9UKI2 254 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 PCTPQ9UKL6 214 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 RNF112Q9ULX5 631 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 LIPT1Q9Y234 373 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 DHRS7Q9Y394 339 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 NUBP2Q9Y5Y2 271 aa4.72□□□□□ -1.65
HTT-202ENST00000502820 IGLV3-12A0A075B6K2 115 aa4.71□□□□□ -1.66
HTT-202ENST00000502820 LOC105369274A0A096LPK9 316 aa4.71□□□□□ -1.66
HTT-202ENST00000502820 A0A0A6YYC8 382 aaPredicted RBP4.71□□□□□ -1.66
HTT-202ENST00000502820 LOC102723532A0A0G2JNH3 316 aa4.71□□□□□ -1.66
HTT-202ENST00000502820 RPS10-NUDT3A0A1W2PQS6 291 aa4.71□□□□□ -1.66
HTT-202ENST00000502820 ANKRD61A6NGH8 418 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms