RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TRAPPC13A5PLN9 417 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 LIPT2A6NK58 231 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 CPSF4LA6NMK7 179 aaKnown RBP22.42■■□□□ 1.18
LSM6-202ENST00000502781 ARPC2O15144 300 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 CHP2O43745 196 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 SS18L1O75177 396 aaPredicted RBP22.42■■□□□ 1.18
LSM6-202ENST00000502781 ZNF682O95780 498 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 IDUAP35475 653 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 TFF3Q07654 80 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 BNIP1Q12981 228 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 RNPS1Q15287 305 aaKnown RBP22.42■■□□□ 1.18
LSM6-202ENST00000502781 GTF2IRD2BQ6EKJ0 949 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 PPP4R4Q6NUP7 873 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 C5orf46Q6UWT4 87 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 FAM214BQ7L5A3 538 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 GTF2IRD2Q86UP8 949 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 ABHD3Q8WU67 409 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 HSH2DQ96JZ2 352 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 PTDSS2Q9BVG9 487 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 JKAMPQ9P055 326 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 RPS6KA6Q9UK32 745 aa22.42■■□□□ 1.18
LSM6-202ENST00000502781 ING1Q9UK53 422 aaPredicted RBP22.42■■□□□ 1.18
LSM6-202ENST00000502781 CYTIPO60759 359 aa22.41■■□□□ 1.18
LSM6-202ENST00000502781 GMNNO75496 209 aa22.41■■□□□ 1.18
LSM6-202ENST00000502781 IFI44LQ53G44 452 aa22.41■■□□□ 1.18
LSM6-202ENST00000502781 ABLIM2Q6H8Q1 611 aa22.41■■□□□ 1.18
LSM6-202ENST00000502781 GEMIN6Q8WXD5 167 aaKnown RBP22.41■■□□□ 1.18
LSM6-202ENST00000502781 STARD4Q96DR4 205 aa22.41■■□□□ 1.18
LSM6-202ENST00000502781 DNAJA3Q96EY1 480 aa22.41■■□□□ 1.18
LSM6-202ENST00000502781 ZNF426Q9BUY5 554 aa22.41■■□□□ 1.18
LSM6-202ENST00000502781 KCNJ16Q9NPI9 418 aa22.41■■□□□ 1.18
LSM6-202ENST00000502781 SELENONQ9NZV5 590 aa22.41■■□□□ 1.18
LSM6-202ENST00000502781 IGHV3-15A0A0B4J1V0 119 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 FAM90A27PA6NNH2 459 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 FTCDNL1E5RQL4 147 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 EIF1BO60739 113 aaKnown RBP22.4■■□□□ 1.18
LSM6-202ENST00000502781 SLC35A1P78382 337 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 DEF8Q6ZN54 512 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 ZHX1-C8orf76Q96EF9 292 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 KTI12Q96EK9 354 aaPredicted RBP22.4■■□□□ 1.18
LSM6-202ENST00000502781 MPP4Q96JB8 637 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 TMEM43Q9BTV4 400 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 AMBRA1Q9C0C7 1298 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 BCO1Q9HAY6 547 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 PLEKHB1Q9UF11 243 aaPredicted RBP22.4■■□□□ 1.18
LSM6-202ENST00000502781 SAMD4AQ9UPU9 718 aaKnown RBP22.4■■□□□ 1.18
LSM6-202ENST00000502781 HECTD1Q9ULT8 2610 aa22.4■■□□□ 1.18
LSM6-202ENST00000502781 NKX2-6A6NCS4 301 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 ZNF814B7Z6K7 855 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 PRKD3O94806 890 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 OR5F1O95221 314 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 GPIP06744 558 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 FPR1P21462 350 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 OR2B6P58173 313 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 PDK3Q15120 406 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 FBXL19-AS1Q494R0 122 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 VWA1Q6PCB0 445 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 PAQR6Q6TCH4 344 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 WDR88Q6ZMY6 472 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 TSEN54Q7Z6J9 526 aaKnown RBP22.39■■□□□ 1.18
LSM6-202ENST00000502781 MFSD8Q8NHS3 518 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 SLC41A3Q96GZ6 507 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 PSD2Q9BQI7 771 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 PRSS27Q9BQR3 290 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 PIGMQ9H3S5 423 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 SLC7A7Q9UM01 511 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 CLEC4AQ9UMR7 237 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 MPDZO75970 2070 aa22.39■■□□□ 1.18
LSM6-202ENST00000502781 AHSA1O95433 338 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 CGAP01215 116 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 IFNW1P05000 195 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 PIN1Q13526 163 aaPredicted RBP22.38■■□□□ 1.17
LSM6-202ENST00000502781 FKBP9P1Q75LS8 142 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 GDF7Q7Z4P5 450 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 BTLAQ7Z6A9 289 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 FAM86B1Q8N7N1 296 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 ACBD4Q8NC06 268 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 OR6S1Q8NH40 331 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 NSMCE2Q96MF7 247 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 MUC13Q9H3R2 512 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 ACTR3BQ9P1U1 418 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 KLHL9Q9P2J3 617 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 KLHL13Q9P2N7 655 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 A4GNTQ9UNA3 340 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 ZNF716A6NP11 495 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 PLGP00747 810 aaPredicted RBP22.38■■□□□ 1.17
LSM6-202ENST00000502781 THRBP10828 461 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 GRNP28799 593 aaKnown RBP22.38■■□□□ 1.17
LSM6-202ENST00000502781 AGTR1P30556 359 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 ASCL1P50553 236 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 TRIM25Q14258 630 aaKnown RBP22.38■■□□□ 1.17
LSM6-202ENST00000502781 OR7A5Q15622 319 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 DNAL1Q4LDG9 190 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 FAM69AQ5T7M9 428 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 MCEMP1Q8IX19 187 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 CNEP1R1Q8N9A8 125 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 OR6K3Q8NGY3 331 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 TAAR8Q969N4 342 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 PRRC1Q96M27 445 aa22.38■■□□□ 1.17
LSM6-202ENST00000502781 BTBD10Q9BSF8 475 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms