RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 LIPIQ6XZB0 460 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 TMEM25Q86YD3 366 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 TCEAL8Q8IYN2 117 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 PLA2G15Q8NCC3 412 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 SLC2A12Q8TD20 617 aa16.02■□□□□ 0.15
HMGXB3-201ENST00000502717 DCDC2BA2VCK2 349 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 C2orf74A8MZ97 194 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 ZNF217O75362 1048 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 PEX11BO96011 259 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 ELOCQ15369 112 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 DGLUCYQ7Z3D6 616 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 DUSP18Q8NEJ0 188 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 CHST8Q9H2A9 424 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 NOX4Q9NPH5 578 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 SLC6A14Q9UN76 642 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 A0A1B0GUH1 482 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 IFNA2P01563 188 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 C14orf28Q4W4Y0 310 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 PRRT3Q5FWE3 981 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 SLC6A20Q9NP91 592 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 HEPACAM2A8MVW5 462 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 ADAM12O43184 909 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 EIF4EP06730 217 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 LUMP51884 338 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 DEFA6Q01524 100 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 HMGN3Q15651 99 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 PRAMEF8Q5VWM4 474 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 PRAMEF7Q5VXH5 474 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 ZNF565Q8N9K5 539 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 SERINC2Q96SA4 455 aa16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 ZNF701Q9NV72 531 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-201ENST00000502717 A0A087WUU8 490 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 SNRNP70P08621 437 aaKnown RBP16■□□□□ 0.15
HMGXB3-201ENST00000502717 S100PP25815 95 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 Q499Y3 187 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16■□□□□ 0.15
HMGXB3-201ENST00000502717 PRTFDC1Q9NRG1 225 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 FTSJ1Q9UET6 329 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 GAAP10253 952 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 ANXA7P20073 488 aaKnown RBP16■□□□□ 0.15
HMGXB3-201ENST00000502717 ARL6IP1Q15041 203 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 ZNF385BQ569K4 471 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 SPIN3Q5JUX0 258 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 GDF7Q7Z4P5 450 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 DTD2Q96FN9 168 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 SLC25A21Q9BQT8 299 aaPredicted RBP16■□□□□ 0.15
HMGXB3-201ENST00000502717 MS4A8Q9BY19 250 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 C12orf10Q9HB07 376 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 SDHAF3Q9NRP4 125 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 TRIM64A6NGJ6 449 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 OIP5O43482 229 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 B4GALT3O60512 393 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 KCNJ13O60928 360 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 PAPLNO95428 1278 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 TIMP2P16035 220 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 NPPBP16860 134 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 CRMP1Q14194 572 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 C12orf73Q69YU5 71 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 SLC29A4Q7RTT9 530 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 ADGRG3Q86Y34 549 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 C3orf49Q96BT1 292 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 HCAR1Q9BXC0 346 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 MAN2C1Q9NTJ4 1040 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 HCRTR2O43614 444 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 RDH16O75452 317 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 SRMP19623 302 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 NKX6-1P78426 367 aaPredicted RBP16■□□□□ 0.15
HMGXB3-201ENST00000502717 CAMK2BQ13554 666 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 ZNF704Q6ZNC4 412 aaPredicted RBP16■□□□□ 0.15
HMGXB3-201ENST00000502717 LINC01599Q8WXQ3 324 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 C16orf58Q96GQ5 468 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 AMDHD1Q96NU7 426 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 GLIPR2Q9H4G4 154 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 LIN7BQ9HAP6 207 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 SCML1Q9UN30 329 aa16■□□□□ 0.15
HMGXB3-201ENST00000502717 KIAA0355O15063 1070 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 STEAP1BQ6NZ63 245 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 LPCAT3Q6P1A2 487 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 RFLNAQ6ZTI6 216 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 HTR3DQ70Z44 454 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 CLRN3Q8NCR9 226 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 ZNF740Q8NDX6 193 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 CASD1Q96PB1 797 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 OR2M4Q96R27 311 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 INTS14Q96SY0 518 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 SMCO4Q9NRQ5 59 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 CYSLTR2Q9NS75 346 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 TAAR2Q9P1P5 351 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 POMT2Q9UKY4 750 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 CYP8B1Q9UNU6 501 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 UBR3Q6ZT12 1888 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 C17orf113A0A1B0GUU1 675 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 SNRPGP15A8MWD9 76 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 PNMTP11086 282 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 LIPCP11150 499 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 TEAD1P28347 426 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 DMWDQ09019 674 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 TCEAL6Q6IPX3 200 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 C1orf94Q6P1W5 598 aa15.99■□□□□ 0.15
HMGXB3-201ENST00000502717 OR52I2Q8NH67 350 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms