RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CLINT1Q14677 625 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 TCEA2Q15560 299 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 EIF2S3LQ2VIR3 472 aaKnown RBP12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 TXNDC8Q6A555 127 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 BAIAP2L2Q6UXY1 529 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 HTR3DQ70Z44 454 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 CHST9Q7L1S5 443 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 RELTQ969Z4 430 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 MACROD1Q9BQ69 325 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 CLEC4EQ9ULY5 219 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 DENND4AQ7Z401 1863 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 TMEM272A0A1B0GTI8 110 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ANXA2P07355 339 aaKnown RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ZDHHC11BP0C7U3 371 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 SMIM6P0DI80 62 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 SPINT3P49223 89 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 PEA15Q15121 130 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 STPG1Q5TH74 334 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 FIP1L1Q6UN15 594 aaKnown RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ETV3LQ6ZN32 361 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 TRAPPC5Q8IUR0 188 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 CCDC116Q8IYX3 515 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 GTPBP8Q8N3Z3 284 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 LNX2Q8N448 690 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 OR10R2Q8NGX6 335 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 OR56A3Q8NH54 315 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 SLC25A38Q96DW6 304 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 SLC22A12Q96S37 553 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 PAPOLGQ9BWT3 736 aaKnown RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 KLHL28Q9NXS3 571 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 AHSPQ9NZD4 102 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 FBXO4Q9UKT5 387 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 SDK1Q7Z5N4 2213 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 MEX3AA1L020 520 aaKnown RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 FAM86C2PA6NEL3 165 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 RPP14O95059 124 aaKnown RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 SNAPINO95295 136 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ZNF14P17017 642 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ITPKBP27987 946 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 NRG3P56975 720 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ACER2Q5QJU3 275 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 DCUN1D3Q8IWE4 304 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 CBARPQ8N350 705 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 SLC41A3Q96GZ6 507 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 TEAD3Q99594 435 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ZNF559Q9BR84 538 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.07□□□□□ -0.485e-11■■■■□ 24
GAPVD1-220ENST00000497580 TRAV27A0A087WT01 109 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 RBBP9O75884 186 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ACTL6AO96019 429 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 GAAP10253 952 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 GALP22466 123 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 BDH1Q02338 343 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 RIPPLY1Q0D2K3 151 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 CRMP1Q14194 572 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 AGERQ15109 404 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ELFN2Q5R3F8 820 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 TMCO2Q7Z6W1 182 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 JAZF1Q86VZ6 243 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 AMER3Q8N944 861 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ACOT11Q8WXI4 607 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 TM4SF18Q96CE8 201 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 MAP3K3Q99759 626 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 DZANK1Q9NVP4 752 aa12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 NOP16Q9Y3C1 178 aaKnown RBP12.07□□□□□ -0.48
GAPVD1-220ENST00000497580 ANKRD20A5PA0PJZ0 165 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 IDSB3KWA1 339 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 LATS1O95835 1130 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 SBK2P0C263 348 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 TEAD1P28347 426 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 FAUP35544 74 aaKnown RBP12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 ZNF85Q03923 595 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 KRBOX4Q5JUW0 171 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 C9orf64Q5T6V5 341 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 NXPE4Q6UWF7 544 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 KRT77Q7Z794 578 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 SERINC5Q86VE9 423 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 PFN4Q8NHR9 129 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 UROC1Q96N76 676 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 CNTNAP3BQ96NU0 1288 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 HRH4Q9H3N8 390 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 SPG21Q9NZD8 308 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 ACOT7O00154 380 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 RPA2P15927 270 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 NQO2P16083 231 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 S100PP25815 95 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 AQP2P41181 271 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 KHKP50053 298 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 TAS2R43P59537 309 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 KRT33BQ14525 404 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 FAM199XQ6PEV8 388 aaPredicted RBP12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 USP53Q70EK8 1073 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 SAMD14Q8IZD0 417 aaPredicted RBP12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 STEAP2Q8NFT2 490 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 OR2AP1Q8NGE2 309 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 SUN3Q8TAQ9 357 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 GLIPR2Q9H4G4 154 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 SUV39H2Q9H5I1 410 aa12.06□□□□□ -0.48
GAPVD1-220ENST00000497580 ENTPD4Q9Y227 616 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms