RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 HMGB2P26583 209 aaKnown RBP3.17□□□□□ -1.9
SMC4-224ENST00000494612 SLC26A2P50443 739 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 SLC10A7Q0GE19 358 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 ZNF79Q15937 498 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 TATDN3Q17R31 274 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 LIPNQ5VXI9 398 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 TMEM179BQ7Z7N9 219 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 ZNF589Q86UQ0 364 aaPredicted RBP3.17□□□□□ -1.9
SMC4-224ENST00000494612 TPRA1Q86W33 373 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 TGIF2LYQ8IUE0 185 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 NRMQ8IXM6 262 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 TMEM123Q8N131 208 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 GMCL1P1Q8NEA9 526 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 OR2T3Q8NH03 318 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 RAPGEF5Q92565 580 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 NEIL2Q969S2 332 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 SH3YL1Q96HL8 342 aaPredicted RBP3.17□□□□□ -1.9
SMC4-224ENST00000494612 ZIM3Q96PE6 472 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 ZNF184Q99676 751 aaPredicted RBP3.17□□□□□ -1.9
SMC4-224ENST00000494612 CITED1Q99966 193 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 SIGLEC8Q9NYZ4 499 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 EPS15L1Q9UBC2 864 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 MRPS33Q9Y291 106 aaKnown RBP3.17□□□□□ -1.9
SMC4-224ENST00000494612 CICQ96RK0 1608 aaPredicted RBP3.17□□□□□ -1.9
SMC4-224ENST00000494612 NFAT5O94916 1531 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 TTC21BQ7Z4L5 1316 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 TTC21AQ8NDW8 1320 aa3.17□□□□□ -1.9
SMC4-224ENST00000494612 CENPJQ9HC77 1338 aaPredicted RBP3.17□□□□□ -1.9
SMC4-224ENST00000494612 PCNTO95613 3336 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 PKD1L3Q7Z443 1732 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 PLEKHG2Q9H7P9 1386 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 N4BP2Q86UW6 1770 aaPredicted RBP3.16□□□□□ -1.9
SMC4-224ENST00000494612 KCPQ6ZWJ8 1503 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 METTL21EPA6NDL7 271 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 PP2D1A8MPX8 630 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 RTL8CO15255 209 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 LYPD3O95274 346 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 ADCY5O95622 1261 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 GNA14O95837 355 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 IQCF3P0C7M6 154 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 IGLL1P15814 213 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 ZP3P21754 424 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 AP3M2P53677 418 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 CBX1P83916 185 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 RIPPLY1Q0D2K3 151 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 LRRC36Q1X8D7 754 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 TRIM16LQ309B1 348 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 DNM1P46Q6ZS02 220 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 ARL6IP6Q8N6S5 226 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 FAM3CQ92520 227 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 NUS1Q96E22 293 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 PELI1Q96FA3 418 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 IL36GQ9NZH8 169 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 ONECUT1Q9UBC0 465 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 RNF14Q9UBS8 474 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 WARS2Q9UGM6 360 aaKnown RBP3.16□□□□□ -1.9
SMC4-224ENST00000494612 SCML2Q9UQR0 700 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 MEMO1Q9Y316 297 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 USP54Q70EL1 1684 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 TNRC6CQ9HCJ0 1690 aaKnown RBP3.16□□□□□ -1.9
SMC4-224ENST00000494612 FAM208AQ9UK61 1670 aaKnown RBP3.16□□□□□ -1.9
SMC4-224ENST00000494612 NSD3Q9BZ95 1437 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 EVC2Q86UK5 1308 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 KIF16BQ96L93 1317 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 C4BP0C0L5 1744 aa3.16□□□□□ -1.9
SMC4-224ENST00000494612 NSD2O96028 1365 aa3.15□□□□□ -1.9
SMC4-224ENST00000494612 KTN1Q86UP2 1357 aaKnown RBP3.15□□□□□ -1.9
SMC4-224ENST00000494612 TAF1LQ8IZX4 1826 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 IGHV2-70DA0A0C4DH43 119 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 LRP5LA4QPB2 252 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 K7N7A8 449 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 PRRG1O14668 218 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 ANGPT2O15123 496 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 HDAC3O15379 428 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 RS1O15537 224 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 TPST2O60704 377 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 KRT8P05787 483 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 RBMY1CP0DJD4 496 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 CYP2B6P20813 491 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 PCMT1P22061 227 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 AQP1P29972 269 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 NTSP30990 170 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 KIR2DS2P43631 304 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 OC90Q02509 493 aaPredicted RBP3.15□□□□□ -1.91
SMC4-224ENST00000494612 ANKDD1AQ495B1 522 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 CCDC152Q4G0S7 254 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 TTC23Q5W5X9 447 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 TPGS2Q68CL5 300 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 FAM71F2Q6NXP2 309 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 CCDC137Q6PK04 289 aaKnown RBP3.15□□□□□ -1.91
SMC4-224ENST00000494612 TFAP2EQ6VUC0 442 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 ZNF100Q8IYN0 542 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 PRR22Q8IZ63 422 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 CLDN19Q8N6F1 224 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 TMEM252Q8N6L7 170 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 C14orf178Q8N769 122 aaPredicted RBP3.15□□□□□ -1.91
SMC4-224ENST00000494612 C15orf54Q8N8G6 183 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 ANKRD49Q8WVL7 239 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 FGGYQ96C11 551 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 PHYHIPLQ96FC7 376 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms