RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 WDR60Q8WVS4 1066 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 CNOT9Q92600 299 aaKnown RBP8.43□□□□□ -1.06
UBR4-216ENST00000494503 AURKBQ96GD4 344 aaPredicted RBP8.43□□□□□ -1.06
UBR4-216ENST00000494503 PKNOX2Q96KN3 472 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 MUS81Q96NY9 551 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 SORCS2Q96PQ0 1159 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 ALKBH3Q96Q83 286 aaPredicted RBP8.43□□□□□ -1.06
UBR4-216ENST00000494503 SLC35A5Q9BS91 424 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 TAPBPLQ9BX59 468 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 FLVCR1Q9Y5Y0 555 aa8.43□□□□□ -1.06
UBR4-216ENST00000494503 A0A096LPE4 126 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 GOLGA8QA0A0J9YX86 632 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 A0A1W2PPZ6 126 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 SLC35F4A4IF30 521 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 GOLGA8OA6NCC3 632 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 ZNF587BE7ETH6 402 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 GOLGA8NF8WBI6 632 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 AKR7A3O95154 331 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 LGI1O95970 557 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 CRYAAP02489 173 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 GPIP06744 558 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 ERCC1P07992 297 aaPredicted RBP8.42□□□□□ -1.06
UBR4-216ENST00000494503 NR2F1P10589 423 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 IL7RP16871 459 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 CXCR1P25024 350 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 MPGP29372 298 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 S100A3P33764 101 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 SERPINB5P36952 375 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 SERPINF1P36955 418 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 SRP14P37108 136 aaKnown RBP8.42□□□□□ -1.06
UBR4-216ENST00000494503 CLK1P49759 484 aaKnown RBP8.42□□□□□ -1.06
UBR4-216ENST00000494503 ANXA11P50995 505 aaKnown RBP8.42□□□□□ -1.06
UBR4-216ENST00000494503 SLC16A1P53985 500 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 TUBA1BP68363 451 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 TUBA4AP68366 448 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 IL1RL1Q01638 556 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 EMX2Q04743 252 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 FUT5Q11128 374 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 CEACAM7Q14002 265 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 LIPNQ5VXI9 398 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 TUBA1AQ71U36 451 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 RNF130Q86XS8 419 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 NUDCD3Q8IVD9 361 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 RIBC1Q8N443 379 aaPredicted RBP8.42□□□□□ -1.06
UBR4-216ENST00000494503 WDR31Q8NA23 367 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 C1orf162Q8NEQ5 155 aaPredicted RBP8.42□□□□□ -1.06
UBR4-216ENST00000494503 PMM1Q92871 262 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 ZG16BQ96DA0 208 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 MSI2Q96DH6 328 aaKnown RBP8.42□□□□□ -1.06
UBR4-216ENST00000494503 FOXN4Q96NZ1 517 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 AKTIPQ9H8T0 292 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 CACYBPQ9HB71 228 aaKnown RBP8.42□□□□□ -1.06
UBR4-216ENST00000494503 POLE3Q9NRF9 147 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 TMEM160Q9NX00 188 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 MKS1Q9NXB0 559 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 DCTN4Q9UJW0 460 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 OSGIN1Q9UJX0 560 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 TRAPPC4Q9Y296 219 aa8.42□□□□□ -1.06
UBR4-216ENST00000494503 IGHV4-61A0A0C4DH41 118 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 PRSS51A0A1B0GVH4 220 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 SH3PXD2BA1X283 911 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 ZC3H12DA2A288 527 aaKnown RBP8.41□□□□□ -1.06
UBR4-216ENST00000494503 LRP5LA4QPB2 252 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 CFAP73A6NFT4 308 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 NDUFS8O00217 210 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 DNAJA2O60884 412 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 BPGMP07738 259 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 OR4A8P0C604 315 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 IMPDH2P12268 514 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 NCF2P19878 526 aaPredicted RBP8.41□□□□□ -1.06
UBR4-216ENST00000494503 GTF2E2P29084 291 aaKnown RBP8.41□□□□□ -1.06
UBR4-216ENST00000494503 ARRB2P32121 409 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 SLC1A3P43003 542 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 NR4A2P43354 598 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 CAPZA2P47755 286 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 COPZ1P61923 177 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 NPRL3Q12980 569 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 BNIP2Q12982 314 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 CHI3L2Q15782 390 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 SYPL1Q16563 259 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 FAM174BQ3ZCQ3 159 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 SPANXN4Q5MJ08 99 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 MRPL2Q5T653 305 aaKnown RBP8.41□□□□□ -1.06
UBR4-216ENST00000494503 NIPAL3Q6P499 406 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 PAQR6Q6TCH4 344 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 TRIML2Q8N7C3 387 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 TMEM99Q8N816 258 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 ZNF781Q8N8C0 355 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 ANKFN1Q8N957 763 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 POMGNT2Q8NAT1 580 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 FAM71CQ8NEG0 241 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 OR9K2Q8NGE7 335 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 OR8J2Q8NGG1 315 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 ZNF385AQ96PM9 386 aaKnown RBP8.41□□□□□ -1.06
UBR4-216ENST00000494503 SLC38A2Q96QD8 506 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 PANX1Q96RD7 426 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 PRR14Q9BWN1 585 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 BPESC1Q9GZL8 116 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 DYNLRB1Q9NP97 96 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 EXOSC3Q9NQT5 275 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms