RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ZNF595Q8IYB9 648 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 LAS2Q8IYD9 372 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 KRT78Q8N1N4 520 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 DPP10Q8N608 796 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 LRRC17Q8N6Y2 441 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 DTX3Q8N9I9 347 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ACOT4Q8N9L9 421 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ZFP62Q8NB50 900 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-234ENST00000493923 SRFBP1Q8NEF9 429 aaKnown RBP7.47□□□□□ -1.21
HDAC6-234ENST00000493923 DUSP18Q8NEJ0 188 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 OR8J3Q8NGG0 315 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 OR52H1Q8NGJ2 320 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF721Q8TF20 911 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF431Q8TF32 576 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-234ENST00000493923 UBTD2Q8WUN7 234 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 CHTF18Q8WVB6 975 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 CREB3L1Q96BA8 519 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 SIGLEC11Q96RL6 698 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 RASL10BQ96S79 203 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 SERINC2Q96SA4 455 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 SEPHS2Q99611 448 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 SDHCQ99643 169 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-234ENST00000493923 PITX2Q99697 317 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 GAL3ST1Q99999 423 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 HDHD5Q9BXW7 423 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 OR8D2Q9GZM6 311 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 SRRQ9GZT4 340 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 SHARPINQ9H0F6 387 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ADAP2Q9NPF8 381 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 IL1RAPQ9NPH3 570 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 HPF1Q9NWY4 346 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ZIM2Q9NZV7 527 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 XPR1Q9UBH6 696 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 SEC14L4Q9UDX3 406 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 NDRG3Q9UGV2 375 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 COPS3Q9UNS2 423 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 GMPPBQ9Y5P6 360 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 KIAA1549Q9HCM3 1950 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ITPR3Q14573 2671 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ANKHD1Q8IWZ3 2542 aaKnown RBP7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ABCA4P78363 2273 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 EXPH5Q8NEV8 1989 aa7.46□□□□□ -1.21
HDAC6-234ENST00000493923 A0A1B0GTL3 188 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 C17orf105B2RV13 164 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 WRBO00258 174 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 PLPP1O14494 284 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 GSTA4O15217 222 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 TMPRSS11DO60235 418 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 CDC40O60508 579 aaKnown RBP eCLIP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 KERAO60938 352 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 SEC22BO75396 215 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 SCO1O75880 301 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 ZFAND5O76080 213 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 SOX30O94993 753 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 LRATO95237 230 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 SIX3O95343 332 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 HLA-DQB1P01920 261 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 CLPSP04118 112 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 FGF4P08620 206 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 CCL3P10147 92 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 CD1EP15812 388 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 ABOP16442 354 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 HIST1H1TP22492 207 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 GADD45AP24522 165 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 TNFSF8P32971 234 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 RORCP51449 518 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 SSR4P51571 173 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 ATP12AP54707 1039 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 CLDN20P56880 219 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 RPS13P62277 151 aaKnown RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 SKP1P63208 163 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 IGLV3-21P80748 117 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 RBPJQ06330 500 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 FOXO1Q12778 655 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 CSTF3Q12996 717 aaKnown RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 MAD2L1BPQ15013 274 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 ELAVL1Q15717 326 aaKnown RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.46□□□□□ -1.226e-7■□□□□ 9.1
HDAC6-234ENST00000493923 FAM209BQ5JX69 171 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 CDKL4Q5MAI5 379 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 ELP2Q6IA86 826 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 LAMTOR1Q6IAA8 161 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 RPTNQ6XPR3 784 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 HSDL2Q6YN16 418 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 CFAP77Q6ZQR2 320 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 EIF3MQ7L2H7 374 aaKnown RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 LRRC70Q7Z2Q7 622 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 CCDC71Q8IV32 467 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 FUNDC1Q8IVP5 155 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 C9orf40Q8IXQ3 194 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 TMEM151AQ8N4L1 468 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 EIF4E3Q8N5X7 224 aaKnown RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 TMEM156Q8N614 296 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 ACBD4Q8NC06 268 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 C19orf18Q8NEA5 215 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 OR2M7Q8NG81 312 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 C16orf52Q8NHV5 167 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 HUS1BQ8NHY5 278 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 FAM57AQ8TBR7 257 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 SLC2A12Q8TD20 617 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms