RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 VMP1Q96GC9 406 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 RBM18Q96H35 190 aaKnown RBP2.67□□□□□ -1.98
CD46-217ENST00000493796 PPP1R16AQ96I34 528 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 RPRD1AQ96P16 312 aaPredicted RBP2.67□□□□□ -1.98
CD46-217ENST00000493796 TSGA13Q96PP4 275 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 KLF6Q99612 283 aaPredicted RBP2.67□□□□□ -1.98
CD46-217ENST00000493796 SSX3Q99909 188 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 GABRG3Q99928 467 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 ZNF559Q9BR84 538 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 CARD6Q9BX69 1037 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 TM6SF2Q9BZW4 377 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 TCEAL2Q9H3H9 227 aaPredicted RBP2.67□□□□□ -1.98
CD46-217ENST00000493796 SUDS3Q9H7L9 328 aaPredicted RBP2.67□□□□□ -1.98
CD46-217ENST00000493796 UGT1A7Q9HAW7 530 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 UGT1A10Q9HAW8 530 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 UGT1A8Q9HAW9 530 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 AMBNQ9NP70 447 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 TRPV5Q9NQA5 729 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 DNAJC17Q9NVM6 304 aaKnown RBP2.67□□□□□ -1.98
CD46-217ENST00000493796 ZNHIT6Q9NWK9 470 aaKnown RBP2.67□□□□□ -1.98
CD46-217ENST00000493796 ELOVL2Q9NXB9 296 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 RSPH14Q9UHP6 348 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 GGA2Q9UJY4 613 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 IKZF3Q9UKT9 509 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 OR1A2Q9Y585 309 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 HEY1Q9Y5J3 304 aa2.67□□□□□ -1.98
CD46-217ENST00000493796 MDC1Q14676 2089 aaKnown RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 HEATR5BQ9P2D3 2071 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 LOC285095A0A1B0GVY8 99 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 RNF212BA8MTL3 300 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 DFFAO00273 331 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 CHUKO15111 745 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 TTI1O43156 1089 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 PRPSAP2O60256 369 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 NME6O75414 186 aaPredicted RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 PTMAP06454 111 aaKnown RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 FCGR3AP08637 254 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 GIMD1P0DJR0 217 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 TPBGLP0DKB5 382 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 C8orf89P0DMQ9 161 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 EZRP15311 586 aaKnown RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 OR1E1P30953 314 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 CYLC1P35663 651 aaPredicted RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 COILP38432 576 aaPredicted RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 MAGEA3P43357 314 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 MAGEB1P43366 347 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 SERPINH1P50454 418 aaKnown RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 CDH4P55283 916 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 CLDN6P56747 220 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 GPX6P59796 221 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 XIAPP98170 497 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 SLC34A1Q06495 639 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 KCNJ11Q14654 390 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 MEF2DQ14814 521 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 UAP1Q16222 522 aaPredicted RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 ZNF658BQ4V348 819 aaPredicted RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 BOLA3Q53S33 107 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 WDR25Q64LD2 544 aaPredicted RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 DUPD1Q68J44 220 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 ABRAXAS1Q6UWZ7 409 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 PEX26Q7Z412 305 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 HSD11B1LQ7Z5J1 315 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 SNX32Q86XE0 403 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 SIAH3Q8IW03 269 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 PIANPQ8IYJ0 282 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 RNF10Q8N5U6 811 aaKnown RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 NAT8LQ8N9F0 302 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 SPATA4Q8NEY3 305 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 GOT1L1Q8NHS2 421 aaPredicted RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 LKAAEAR1Q8TD35 194 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 FAM3CQ92520 227 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 PRCCQ92733 491 aaPredicted RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 TCEAL3Q969E4 200 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 ECHDC3Q96DC8 303 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 TBC1D31Q96DN5 1066 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 IMP4Q96G21 291 aaKnown RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 BMFQ96LC9 184 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 SERPINB11Q96P15 392 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 QKIQ96PU8 341 aaKnown RBP eCLIP2.66□□□□□ -1.988e-6■■■■■ 32.9
CD46-217ENST00000493796 P2RY13Q9BPV8 354 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 NUSAP1Q9BXS6 441 aaKnown RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 CALN1Q9BXU9 219 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 ZYG11BQ9C0D3 744 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 ABCG8Q9H221 673 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 NT5MQ9NPB1 228 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 FAM212BQ9NTI7 297 aaPredicted RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 UXTQ9UBK9 157 aaPredicted RBP2.66□□□□□ -1.98
CD46-217ENST00000493796 DNAJB9Q9UBS3 223 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 SUN2Q9UH99 717 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 RNF24Q9Y225 148 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 HS3ST2Q9Y278 367 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 GVINP1Q7Z2Y8 2422 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 CEP250Q9BV73 2442 aa2.66□□□□□ -1.98
CD46-217ENST00000493796 ATRXP46100 2492 aa2.65□□□□□ -1.98
CD46-217ENST00000493796 RIF1Q5UIP0 2472 aaKnown RBP2.65□□□□□ -1.98
CD46-217ENST00000493796 IGHV1OR15-9A0A0B4J2B8 117 aa2.65□□□□□ -1.99
CD46-217ENST00000493796 CTAGE15A4D2H0 777 aa2.65□□□□□ -1.99
CD46-217ENST00000493796 GOLGA8KD6RF30 607 aa2.65□□□□□ -1.99
CD46-217ENST00000493796 F5H5T6 163 aa2.65□□□□□ -1.99
CD46-217ENST00000493796 GOLGA8TH3BQL2 631 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms