RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ZNF664Q8N3J9 261 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 KRTCAP2Q8N6L1 136 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF610Q8N9Z0 462 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 BEND2Q8NDZ0 799 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 TMED6Q8WW62 240 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 CORO2AQ92828 525 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 CASD1Q96PB1 797 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 KLHL5Q96PQ7 755 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 LMF1Q96S06 567 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 SOSTQ9BQB4 213 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 CDT1Q9H211 546 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 UBQLN3Q9H347 655 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 WDCPQ9H6R7 721 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 HMX1Q9NP08 348 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-205ENST00000493587 CYSLTR2Q9NS75 346 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 SLC25A37Q9NYZ2 338 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 GALPQ9UBC7 116 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 FBXL3Q9UKT7 428 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 URGCP-MRPS24S4R325 110 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 BLOC1S5-TXNDC5H3BN57 136 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 MKRN2OSH3BPM6 223 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 GABRPO00591 440 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 SURF4O15260 269 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 MAGEB4O15481 346 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-205ENST00000493587 HBP1O60381 514 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 PQBP1O60828 265 aaKnown RBP6.36□□□□□ -1.39
VPS13B-205ENST00000493587 LRATO95237 230 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 CNOT4O95628 575 aaKnown RBP6.36□□□□□ -1.39
VPS13B-205ENST00000493587 IDSP22304 550 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 NDUFS1P28331 727 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 MPGP29372 298 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 CDKN1BP46527 198 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 CRISP1P54107 249 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 EIF5AP63241 154 aaKnown RBP6.36□□□□□ -1.39
VPS13B-205ENST00000493587 IL10RBQ08334 325 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 PJVKQ0ZLH3 352 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 TMEM95Q3KNT9 176 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 SLC10A6Q3KNW5 377 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 MPPE1Q53F39 396 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 FAHD2BQ6P2I3 314 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-205ENST00000493587 MTSS1LQ765P7 747 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 ERN2Q76MJ5 926 aaKnown RBP6.36□□□□□ -1.39
VPS13B-205ENST00000493587 TMPRSS7Q7RTY8 843 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 TECPR1Q7Z6L1 1165 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 ISCA2Q86U28 154 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 PPP1R3BQ86XI6 285 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 PTOV1Q86YD1 416 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 RNF149Q8NC42 400 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 FAM98AQ8NCA5 519 aaKnown RBP6.36□□□□□ -1.39
VPS13B-205ENST00000493587 PNPLA2Q96AD5 504 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 CMTM7Q96FZ5 175 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 FAHD2AQ96GK7 314 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 DIRC2Q96SL1 478 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 AUNIPQ9H7T9 357 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 TRPV4Q9HBA0 871 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 FOXJ2Q9P0K8 574 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 MAP4K5Q9Y4K4 846 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 COL4A3Q01955 1670 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 SCN5AQ14524 2016 aa6.36□□□□□ -1.39
VPS13B-205ENST00000493587 LNP1A1A4G5 178 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 RNASEK-C17orf49H0YIS7 233 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 CCL22O00626 93 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF821O75541 412 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 RPN2P04844 631 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 IGFBP1P08833 259 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 CPEP16870 476 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 CD96P40200 585 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 NAA10P41227 235 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 MAPK9P45984 424 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 CXCR3P49682 368 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 RASGEF1BQ0VAM2 473 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 LRIF1Q5T3J3 769 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 CD300LGQ6UXG3 332 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 GLDNQ6ZMI3 551 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 C6orf120Q7Z4R8 191 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 OAFQ86UD1 273 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 HS6ST3Q8IZP7 471 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF615Q8N8J6 731 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 RNF141Q8WVD5 230 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 TNFRSF14Q92956 283 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 IP6K3Q96PC2 410 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 EPYCQ99645 322 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 OSMRQ99650 979 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 TM6SF2Q9BZW4 377 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 FAM117AQ9C073 453 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 ELOVL4Q9GZR5 314 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 OR2AG1Q9H205 316 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 SLC26A1Q9H2B4 701 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 SEC61A2Q9H9S3 476 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 BARX1Q9HBU1 254 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 TUBG2Q9NRH3 451 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 RCC2Q9P258 522 aaKnown RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 RHCGQ9UBD6 479 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 A4GNTQ9UNA3 340 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 GTF2A1LQ9UNN4 478 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 PPIL1Q9Y3C6 166 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 MUC22E2RYF6 1773 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-205ENST00000493587 CLIC1O00299 241 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 EMC8O43402 210 aa6.35□□□□□ -1.39
VPS13B-205ENST00000493587 GJB3O75712 270 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms