RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PPP1R3BQ86XI6 285 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 CADM2Q8N3J6 435 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 METTL27Q8N6F8 245 aaPredicted RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 ACBD7Q8N6N7 88 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 MINDY2Q8NBR6 621 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 OR8D4Q8NGM9 314 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 MCFD2Q8NI22 146 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 ZNF721Q8TF20 911 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 UFD1Q92890 307 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 ADIPOR1Q96A54 375 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 GFM1Q96RP9 751 aaKnown RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 NUDT22Q9BRQ3 303 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 RHNO1Q9BSD3 238 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 TAPBPLQ9BX59 468 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 VN1R1Q9GZP7 353 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 NDUFB11Q9NX14 153 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 DHCR7Q9UBM7 475 aaKnown RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 TNFRSF10DQ9UBN6 386 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 STUB1Q9UNE7 303 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 LSM2Q9Y333 95 aaKnown RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 CAB39Q9Y376 341 aaPredicted RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 TMEM184BQ9Y519 407 aaPredicted RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 PCDHGA3Q9Y5H0 932 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 A0A075B6Q4 140 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 NPIPA5A0A0B4J1W7 369 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 IGHV5-10-1A0A0J9YXX1 117 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 CENPVL1A0A0U1RR11 272 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 OR6C70A6NIJ9 312 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 NPIPA7E9PJI5 369 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 BHLHE40O14503 412 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 SCRG1O75711 98 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 CLPSP04118 112 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 HIST1H2ABP04908 130 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 IGFBP1P08833 259 aaPredicted RBP9.16□□□□□ -0.94
PRPF3-206ENST00000493553 INHBBP09529 407 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 NPIPA8P0DM63 369 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 FGF5P12034 268 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 RAC2P15153 192 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 CPEP16870 476 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 MAKP20794 623 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 GADD45AP24522 165 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 CD40LGP29965 261 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 CENPAP49450 140 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 SUMO3P55854 103 aaPredicted RBP9.16□□□□□ -0.94
PRPF3-206ENST00000493553 VBP1P61758 197 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 CCL7P80098 99 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 EGR3Q06889 387 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 CRYZQ08257 329 aaKnown RBP9.16□□□□□ -0.94
PRPF3-206ENST00000493553 AQP6Q13520 282 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 IL10RAQ13651 578 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 TSTQ16762 297 aaKnown RBP9.16□□□□□ -0.94
PRPF3-206ENST00000493553 ZNF404Q494X3 552 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 EMC4Q5J8M3 183 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 FNDC7Q5VTL7 733 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 GUSBP11Q6P575 273 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 HSDL2Q6YN16 418 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 HIST3H2AQ7L7L0 130 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 POMGNT2Q8NAT1 580 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 OR4N2Q8NGD1 307 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 OR4C3Q8NH37 302 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 NUBPLQ8TB37 319 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 STT3BQ8TCJ2 826 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 PHOSPHO1Q8TCT1 267 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 GRHL3Q8TE85 626 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 HIST1H2ACQ93077 130 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 NKD1Q969G9 470 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 PPP1R14BQ96C90 147 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 CLIP3Q96DZ5 547 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 SH3YL1Q96HL8 342 aaPredicted RBP9.16□□□□□ -0.94
PRPF3-206ENST00000493553 EAF1Q96JC9 268 aaPredicted RBP9.16□□□□□ -0.94
PRPF3-206ENST00000493553 DPH1Q9BZG8 443 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 TBL1XR1Q9BZK7 514 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 WWTR1Q9GZV5 400 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 NXF5Q9H1B4 397 aaKnown RBP9.16□□□□□ -0.94
PRPF3-206ENST00000493553 DSN1Q9H410 356 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 WDR54Q9H977 334 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 FLRT3Q9NZU0 649 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 NTNG1Q9Y2I2 539 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 PCDHGA5Q9Y5G8 931 aa9.16□□□□□ -0.94
PRPF3-206ENST00000493553 UNC13CQ8NB66 2214 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 ARID1BQ8NFD5 2236 aaPredicted RBP9.15□□□□□ -0.94
PRPF3-206ENST00000493553 ARPC4-TTLL3A0A0A6YYG9 625 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 LOC100506127A0A0U1RQW1 187 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 M0R129 80 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 HRKO00198 91 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 CDC42EP2O14613 210 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 ALOX12BO75342 701 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 OR7A10O76100 309 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 MT-ATP6P00846 226 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 IL1AP01583 271 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 HPXP02790 462 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 HLA-DPB1P04440 258 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 KLK3P07288 261 aaPredicted RBP9.15□□□□□ -0.94
PRPF3-206ENST00000493553 ZGLP1P0C6A0 271 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 GP1BBP13224 206 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 FUT1P19526 365 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 VAMP1P23763 118 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 GABRA5P31644 462 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 BMXP51813 675 aa9.15□□□□□ -0.94
PRPF3-206ENST00000493553 EMP2P54851 167 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms