RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 DIO1P49895 249 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 CARD18P57730 90 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 CSNK2A1P68400 391 aaPredicted RBP10.37□□□□□ -0.75
CTSA-209ENST00000493522 CBX1P83916 185 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 MYBPHQ13203 477 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 CEACAM7Q14002 265 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 OR1Q1Q15612 314 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 HSPB2Q16082 182 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 ZNF239Q16600 458 aaKnown RBP10.37□□□□□ -0.75
CTSA-209ENST00000493522 SPATS1Q496A3 300 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 DNAL1Q4LDG9 190 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 IFI44LQ53G44 452 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 ENTPD8Q5MY95 495 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 OR2A2Q6IF42 318 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 ULK3Q6PHR2 472 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 VTCN1Q7Z7D3 282 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 ATG4DQ86TL0 474 aaPredicted RBP10.37□□□□□ -0.75
CTSA-209ENST00000493522 ARHGAP24Q8N264 748 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 LSMEM1Q8N8F7 131 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 NAXEQ8NCW5 288 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 DNAJA4Q8WW22 397 aaPredicted RBP10.37□□□□□ -0.75
CTSA-209ENST00000493522 OSTF1Q92882 214 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 CPNE4Q96A23 557 aaPredicted RBP10.37□□□□□ -0.75
CTSA-209ENST00000493522 INTS12Q96CB8 462 aaKnown RBP10.37□□□□□ -0.75
CTSA-209ENST00000493522 ZHX1-C8orf76Q96EF9 292 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 ARL5BQ96KC2 179 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 ZFP3Q96NJ6 502 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 UCN2Q96RP3 112 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 CD300AQ9UGN4 299 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 PRDM4Q9UKN5 801 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 PRPF19Q9UMS4 504 aaKnown RBP10.37□□□□□ -0.75
CTSA-209ENST00000493522 HDGFL3Q9Y3E1 203 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 V9GYQ6 96 aa10.37□□□□□ -0.75
CTSA-209ENST00000493522 VPS13CQ709C8 3753 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 IGHV3-15A0A0B4J1V0 119 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 DVL2O14641 736 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 GYG2O15488 501 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 TPST2O60704 377 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 AQP8O94778 261 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 AHSA1O95433 338 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 PLGP00747 810 aaPredicted RBP10.36□□□□□ -0.75
CTSA-209ENST00000493522 IFNW1P05000 195 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 PNMTP11086 282 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 IGFBP2P18065 325 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 FKBP2P26885 142 aaKnown RBP10.36□□□□□ -0.75
CTSA-209ENST00000493522 CEACAM8P31997 349 aaPredicted RBP10.36□□□□□ -0.75
CTSA-209ENST00000493522 IDUAP35475 653 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 CLK1P49759 484 aaKnown RBP10.36□□□□□ -0.75
CTSA-209ENST00000493522 MAP2K6P52564 334 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 ART1P52961 327 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 OR2B6P58173 313 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 TAS2R41P59536 307 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 SELENOWP63302 87 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 SIRPAP78324 504 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 ZNF613Q6PF04 617 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 C6orf89Q6UWU4 347 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 TMPPEQ6ZT21 453 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 FKBP9P1Q75LS8 142 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 CBLL1Q75N03 491 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 TMEM200AQ86VY9 491 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 ADAMTS16Q8TE57 1224 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 GEMIN6Q8WXD5 167 aaKnown RBP10.36□□□□□ -0.75
CTSA-209ENST00000493522 ROBO4Q8WZ75 1007 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 CCDC124Q96CT7 223 aaKnown RBP10.36□□□□□ -0.75
CTSA-209ENST00000493522 SLC47A1Q96FL8 570 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 NSMCE2Q96MF7 247 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 PCDHAC1Q9H158 963 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 C1orf21Q9H246 121 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 C12orf10Q9HB07 376 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 TAS2R1Q9NYW7 299 aa10.36□□□□□ -0.75
CTSA-209ENST00000493522 SAMD4AQ9UPU9 718 aaKnown RBP10.36□□□□□ -0.75
CTSA-209ENST00000493522 MAP1AP78559 2803 aaPredicted RBP10.36□□□□□ -0.75
CTSA-209ENST00000493522 FREM1Q5H8C1 2179 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 TRAPPC13A5PLN9 417 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 A8MVM7 634 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 CHP2O43745 196 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 RCBTB2O95199 551 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 PMS2P2O95744 297 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 BMP5P22003 454 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 ENPP1P22413 925 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 CTSSP25774 331 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 AGFG1P52594 562 aaKnown RBP10.35□□□□□ -0.75
CTSA-209ENST00000493522 CDH12P55289 794 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 RAC3P60763 192 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 FOXF2Q12947 444 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 FXNQ16595 210 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 SWT1Q5T5J6 900 aaKnown RBP10.35□□□□□ -0.75
CTSA-209ENST00000493522 C1orf140Q5VVS0 124 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 FCRLAQ7L513 359 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 CNEP1R1Q8N9A8 125 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 RNF128Q8TEB7 428 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 CLPTM1LQ96KA5 538 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 THTPAQ9BU02 230 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 TAPBPLQ9BX59 468 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 MUC13Q9H3R2 512 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 RNF122Q9H9V4 155 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 SLC24A3Q9HC58 644 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 KCNJ16Q9NPI9 418 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 SLC7A7Q9UM01 511 aa10.35□□□□□ -0.75
CTSA-209ENST00000493522 CLEC4AQ9UMR7 237 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms