RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ACACBO00763 2458 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 PTGES3LE9PB15 166 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 G3V3Y1 287 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 H3BN98 237 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 MAGEB3O15480 346 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 ZZEF1O43149 2961 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 CLPXO76031 633 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 INMTO95050 263 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 SOX14O95416 240 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 WDPCPO95876 746 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 F10P00742 488 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 PRKCAP17252 672 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 CHMP24386 653 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 CRYZQ08257 329 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 AQP6Q13520 282 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 ARSKQ6UWY0 536 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 RASSF6Q6ZTQ3 369 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 TMPRSS11FQ6ZWK6 438 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 P3H2Q8IVL5 708 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 OR1J4Q8NGS1 313 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 FAR1Q8WVX9 515 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 TRUB1Q8WWH5 349 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 ABTB1Q969K4 478 aaPredicted RBP12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 TMEM41AQ96HV5 264 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 PITX2Q99697 317 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 APOL4Q9BPW4 351 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 DUSP21Q9H596 190 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 MED17Q9NVC6 651 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 FBXL2Q9UKC9 423 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 NDRG4Q9ULP0 352 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 VDAC3Q9Y277 283 aa12.78□□□□□ -0.36
PDZRN3-210ENST00000492909 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 HTR3EA5X5Y0 456 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 TMEM8BA6NDV4 472 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 FAM47E-STBD1D6RA91 191 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 E9PQ18 207 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 CDC42EP2O14613 210 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 SNPHO15079 494 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 RRP8O43159 456 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 EFSO43281 561 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 MRPS14O60783 128 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 SAGP10523 405 aaPredicted RBP12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 MAKP20794 623 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 POU1F1P28069 291 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 BMXP51813 675 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 DLX5P56178 289 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 EMX1Q04741 257 aaPredicted RBP12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 SPCS2Q15005 226 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 PTGES3Q15185 160 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 DEFB109BQ30KR1 87 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 SPINK14Q6IE38 97 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 POMZP3Q6PJE2 187 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 LSRQ86X29 649 aaPredicted RBP12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 C1GALT1C1Q96EU7 318 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 CCDC90BQ9GZT6 254 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 SCN3BQ9NY72 215 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 ERVK-18Q9QC07 812 aa12.77□□□□□ -0.36
PDZRN3-210ENST00000492909 IGKV1D-42A0A075B6H8 117 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 TMED7-TICAM2A0A0A6YYA0 188 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 UNC119BA6NIH7 251 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 ETV2O00321 342 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 XPNPEP2O43895 674 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 SLC25A12O75746 678 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 NEURL1O76050 574 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 IGF2P01344 180 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 TP53P04637 393 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 ZNF12P17014 697 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 FMO3P31513 532 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 APOBEC1P41238 236 aaKnown RBP12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 DNASE1L1P49184 302 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 CCL11P51671 97 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 SLC35A2P78381 396 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 TLE3Q04726 772 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 MFAP5Q13361 173 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 OR1C1Q15619 314 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 PLPPR5Q32ZL2 321 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 TIGD3Q6B0B8 471 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 Q6ZPB1 254 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 MRGPRX4Q96LA9 322 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 JSRP1Q96MG2 331 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 ZNF552Q9H707 407 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 RHBDL2Q9NX52 303 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 TMED7Q9Y3B3 224 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 MAP1BP46821 2468 aaKnown RBP12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 OR5H15A6NDH6 313 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 ZAR1LA6NP61 321 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 EFCAB9A8MZ26 197 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 TRIM3O75382 744 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 CBR3O75828 277 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 GABARAPO95166 117 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 IGFBP1P08833 259 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 CNR1P21554 472 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 ACVR2AP27037 513 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 GGT2P36268 569 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 EGR4Q05215 589 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 FOXF1Q12946 379 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 MAD2L1BPQ15013 274 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 CTF1Q16619 201 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 SLC25A53Q5H9E4 307 aa12.76□□□□□ -0.37
PDZRN3-210ENST00000492909 ZNF620Q6ZNG0 422 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms