RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 EPHA6Q9UF33 1036 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 GLS2Q9UI32 602 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 PSORS1C1Q9UIG5 152 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 GPR160Q9UJ42 338 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF221Q9UK13 617 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 TFR2Q9UP52 801 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 FARSAQ9Y285 508 aaKnown RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SNX24Q9Y343 169 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 CCDC144AA2RUR9 1427 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 SHISA3A0PJX4 238 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 IGLON5A6NGN9 336 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 TRDCB7Z8K6 153 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 C21orf140B9A014 251 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 PRSS46E5RG02 174 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 F5H5T6 163 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 F5H768 121 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 CLDN5O00501 218 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 TMPRSS2O15393 492 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 FGF10O15520 208 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 ZBTB7AO95365 584 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 GH2P01242 217 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 NR3C1P04150 777 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 HIST1H2ABP04908 130 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 NPSP0C0P6 89 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 IRF1P10914 325 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 MBL2P11226 248 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 FCER1AP12319 257 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 HIST1H2ADP20671 130 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 FUT3P21217 361 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 BCKDHBP21953 392 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 CA4P22748 312 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 FPR3P25089 353 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 EPHA3P29320 983 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 CEACAM8P31997 349 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 TTPAP49638 278 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 HLCSP50747 726 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 RPL32P62910 135 aaKnown RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 IL13RA1P78552 427 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 DLK1P80370 383 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 SLC7A9P82251 487 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 HHEXQ03014 270 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 TLE4Q04727 773 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 ACVR1Q04771 509 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 EXOSC2Q13868 293 aaKnown RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 KCNJ11Q14654 390 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 NFATC4Q14934 902 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 SMIM21Q3B7S5 101 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF528Q3MIS6 628 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 RNF212Q495C1 297 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 LIN52Q52LA3 116 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 RNASE10Q5GAN6 216 aaKnown RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 EMC4Q5J8M3 183 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 FGD3Q5JSP0 725 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 RBM48Q5RL73 367 aaKnown RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 OTUD3Q5T2D3 398 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 MROH9Q5TGP6 573 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 WDR25Q64LD2 544 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM42Q69YG0 159 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF774Q6NX45 483 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 SCIMPQ6UWF3 145 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 DRAM2Q6UX65 266 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 CDHR3Q6ZTQ4 885 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 HIST3H2AQ7L7L0 130 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 LINGO2Q7L985 606 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 TRMT1LQ7Z2T5 733 aaKnown RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 PPP1R32Q7Z5V6 425 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 ISCA2Q86U28 154 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 SATL1Q86VE3 508 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 UNC93AQ86WB7 457 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 PDSS2Q86YH6 399 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 GPSM1Q86YR5 675 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 LILRA3Q8N6C8 439 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 ZSCAN4Q8NAM6 433 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 TXNDC5Q8NBS9 432 aaKnown RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 NPEPL1Q8NDH3 523 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 OR10G3Q8NGC4 313 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 OR9Q2Q8NGE9 314 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 OR4D5Q8NGN0 318 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 OR2Y1Q8NGV0 311 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 OR5AK3PQ8NH89 298 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 COQ8AQ8NI60 647 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 FCAMRQ8WWV6 532 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 PINX1Q96BK5 328 aaKnown RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 MOAP1Q96BY2 351 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 CXorf40BQ96DE9 158 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 CPNE2Q96FN4 548 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 MBOAT4Q96T53 435 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 MRPS26Q9BYN8 205 aaKnown RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 ING2Q9H160 280 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 UBE2ZQ9H832 354 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 TPT1P8Q9HAU6 139 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 POPDC2Q9HBU9 364 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 LRRC4CQ9HCJ2 640 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 MIEF1Q9NQG6 463 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 AGPAT4Q9NRZ5 378 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 ADARB2Q9NS39 739 aaKnown RBP3.83□□□□□ -1.8
BRCA1-220ENST00000492859 FGFR1OP2Q9NVK5 253 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 OR12D3Q9UGF7 316 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 IKZF2Q9UKS7 526 aa3.83□□□□□ -1.8
BRCA1-220ENST00000492859 MRPS28Q9Y2Q9 187 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms