RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 B3GALNT1O75752 331 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SLITRK5O94991 958 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 IFNGP01579 166 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SERPINA7P05543 415 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ARAFP10398 606 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ERGP11308 486 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 FUT4P22083 530 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 HTR1EP28566 365 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 AGFG1P52594 562 aaKnown RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 PPP5CP53041 499 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 CEBPGP53567 150 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 FOXK1P85037 733 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 C17orf67Q0P5P2 114 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 KCNJ8Q15842 424 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 DUSP7Q16829 419 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 COL28A1Q2UY09 1125 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 MSANTD1Q6ZTZ1 278 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 HS3ST5Q8IZT8 346 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF615Q8N8J6 731 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SYT14Q8NB59 555 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 GOLM1Q8NBJ4 401 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 OR51L1Q8NGJ5 315 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ADAMTS14Q8WXS8 1223 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 NKD1Q969G9 470 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 COQ8BQ96D53 544 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ZG16BQ96DA0 208 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SLC41A3Q96GZ6 507 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 FAM46AQ96IP4 442 aaKnown RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF578Q96N58 590 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF583Q96ND8 569 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 FOXN4Q96NZ1 517 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 CPPED1Q9BRF8 314 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 POLDIP3Q9BY77 421 aaKnown RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 DPH1Q9BZG8 443 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 RAB33BQ9H082 229 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 TP63Q9H3D4 680 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SRA1Q9HD15 236 aaKnown RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 AGPAT4Q9NRZ5 378 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SLC25A37Q9NYZ2 338 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF443Q9Y2A4 671 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 HS3ST3B1Q9Y662 390 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 MYO18BQ8IUG5 2567 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 RIIAD1A6NNX1 92 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 FAM171A2A8MVW0 826 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 HMGN4O00479 90 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 TDGF1P13385 188 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 GGT1P19440 569 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 STOMP27105 288 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ABCD3P28288 659 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 MAN2A2P49641 1150 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 EFNA3P52797 238 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 TLE3Q04726 772 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 RBPJQ06330 500 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 CBFBQ13951 182 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SLC10A1Q14973 349 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SGCAQ16586 387 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 CLPPQ16740 277 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF766Q5HY98 468 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 WIPI1Q5MNZ9 446 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 TMEM236Q5W0B7 351 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 PLEKHG7Q6ZR37 379 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF767PQ75MW2 155 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SERPINA11Q86U17 422 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 CHERPQ8IWX8 916 aaKnown RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 NSMAFQ92636 917 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 TMIGD2Q96BF3 282 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SPACA9Q96E40 222 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 RADILQ96JH8 1075 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 S100A13Q99584 98 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 VCANP13611 3396 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 FXYD6-FXYD2A0A087WZ82 144 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 DISC1C4P0D8 188 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 MPZL2O60487 215 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 WDPCPO95876 746 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 IFNA6P05013 189 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ANKRD34CP0C6C1 535 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF43P17038 809 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SELENOWP63302 87 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 PMP22Q01453 160 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ESPL1Q14674 2120 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 OR1Q1Q15612 314 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 GLYR1Q49A26 553 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ENTPD8Q5MY95 495 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SLC6A19Q695T7 634 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SLC25A25Q6KCM7 469 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 GFRALQ6UXV0 394 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 OR4K5Q8NGD3 323 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 OR9Q2Q8NGE9 314 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 LILRB4Q8NHJ6 448 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 LGALS12Q96DT0 336 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 SGTBQ96EQ0 304 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 MUS81Q96NY9 551 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 TSNAXQ99598 290 aaKnown RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 WACQ9BTA9 647 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 DDA1Q9BW61 102 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 PINK1Q9BXM7 581 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 OR11A1Q9GZK7 315 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 FXYD6Q9H0Q3 95 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms