RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ZC3H12DA2A288 527 aaKnown RBP13.86□□□□□ -0.19
PLOD3-216ENST00000489927 SLC35F4A4IF30 521 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 VWC2LB2RUY7 222 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 HMGN4O00479 90 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 KLF11O14901 512 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 ITM2AO43736 263 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 SRD5A1P18405 259 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 CDH2P19022 906 aaPredicted RBP13.86□□□□□ -0.19
PLOD3-216ENST00000489927 MPGP29372 298 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 CHI3L1P36222 383 aaPredicted RBP13.86□□□□□ -0.19
PLOD3-216ENST00000489927 SLC1A3P43003 542 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 GZMKP49863 264 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 PRPS1P60891 318 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 HIKESHIQ53FT3 197 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 PAQR6Q6TCH4 344 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 IL17RELQ6ZVW7 336 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 ZNF781Q8N8C0 355 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 ANKFN1Q8N957 763 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 ZIC4Q8N9L1 334 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 VPS37AQ8NEZ2 397 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 PMM1Q92871 262 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 TMEM45BQ96B21 275 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 TESCQ96BS2 214 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 ZIM3Q96PE6 472 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 SORCS2Q96PQ0 1159 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 SLC35A5Q9BS91 424 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 C19orf24Q9BVV8 132 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 PRR14Q9BWN1 585 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 CHODLQ9H9P2 273 aa13.86□□□□□ -0.19
PLOD3-216ENST00000489927 AGAP5A6NIR3 686 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 NDUFS8O00217 210 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 WNT11O96014 354 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 ETV4P43268 484 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 NR4A2P43354 598 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 PDLIM4P50479 330 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 CASP8Q14790 479 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 SYPL1Q16563 259 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 SPANXN4Q5MJ08 99 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 FAM120AOSQ5T036 256 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 OTUD3Q5T2D3 398 aaPredicted RBP13.85□□□□□ -0.19
PLOD3-216ENST00000489927 C1QTNF12Q5T7M4 302 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 FAM166AQ6J272 317 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 KLHL24Q6TFL4 600 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 NUDCD3Q8IVD9 361 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 CMIPQ8IY22 773 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 OR9K2Q8NGE7 335 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.85□□□□□ -0.19
PLOD3-216ENST00000489927 C3orf49Q96BT1 292 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 MSI2Q96DH6 328 aaKnown RBP13.85□□□□□ -0.19
PLOD3-216ENST00000489927 PKNOX2Q96KN3 472 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 ZNF385AQ96PM9 386 aaKnown RBP13.85□□□□□ -0.19
PLOD3-216ENST00000489927 TRNT1Q96Q11 434 aaKnown RBP13.85□□□□□ -0.19
PLOD3-216ENST00000489927 PIMREGQ9BSJ6 248 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 SLC38A1Q9H2H9 487 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 KCNS2Q9ULS6 477 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 FKBP7Q9Y680 259 aa13.85□□□□□ -0.19
PLOD3-216ENST00000489927 IGHV1-18A0A0C4DH31 117 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 LOC100289279A0A1B0GTE1 492 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 TYROBPO43914 113 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 AKR7A3O95154 331 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 CHRM4P08173 479 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 MAP2K6P52564 334 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 SNRPD2P62316 118 aaKnown RBP13.84□□□□□ -0.19
PLOD3-216ENST00000489927 IFFO1Q0D2I5 559 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 CEACAM7Q14002 265 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 AAED1Q7RTV5 226 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 RNF130Q86XS8 419 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 TMEM99Q8N816 258 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 AURKBQ96GD4 344 aaPredicted RBP13.84□□□□□ -0.19
PLOD3-216ENST00000489927 FOXN4Q96NZ1 517 aa13.84□□□□□ -0.19
PLOD3-216ENST00000489927 SF3B5Q9BWJ5 86 aaKnown RBP13.84□□□□□ -0.19
PLOD3-216ENST00000489927 IGHV4-61A0A0C4DH41 118 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 WDR91A4D1P6 747 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 CFAP73A6NFT4 308 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 LIPT2A6NK58 231 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 FAAHO00519 579 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 GPIP06744 558 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 SERPINF1P36955 418 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 EPS8Q12929 822 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 OR7A5Q15622 319 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 CARTPTQ16568 116 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 DPY19L1Q2PZI1 675 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 FAM174BQ3ZCQ3 159 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 MRPL2Q5T653 305 aaKnown RBP13.83□□□□□ -0.2
PLOD3-216ENST00000489927 GPAT4Q86UL3 456 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 ANKS4BQ8N8V4 417 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 POMGNT2Q8NAT1 580 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 WDR60Q8WVS4 1066 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 BOD1Q96IK1 185 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 CCDC115Q96NT0 180 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 VRK1Q99986 396 aaPredicted RBP13.83□□□□□ -0.2
PLOD3-216ENST00000489927 C20orf27Q9GZN8 174 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 ADAM19Q9H013 955 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 CA10Q9NS85 328 aa13.83□□□□□ -0.2
PLOD3-216ENST00000489927 LOC390937A0A1W2PQ73 354 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 AQP7P3A6NL99 342 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 E9PBE3 544 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 C8BP07358 591 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 MYZAPP0CAP1 466 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 APEHP13798 732 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms