RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 MYO1GB0I1T2 1018 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 DNPH1O43598 174 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 PCDH7O60245 1069 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 NKX2-2O95096 273 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 PSMG1O95456 288 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 PMS2P2O95744 297 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 IGHMP01871 453 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 ATP6V1C1P21283 382 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 FUT4P22083 530 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 ELK3P41970 407 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 CAPZA2P47755 286 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 ALDH18A1P54886 795 aaKnown RBP9.78□□□□□ -0.84
HDAC6-233ENST00000489352 GALK2Q01415 458 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 TRMT5Q32P41 509 aaKnown RBP9.78□□□□□ -0.84
HDAC6-233ENST00000489352 PCGF3Q3KNV8 242 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 ALKBH6Q3KRA9 238 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 MSS51Q4VC12 460 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 CAVIN1Q6NZI2 390 aaKnown RBP9.78□□□□□ -0.84
HDAC6-233ENST00000489352 ZAR1Q86SH2 424 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 ISCA2Q86U28 154 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 ZBED8Q8IZ13 594 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 TMEM86BQ8N661 226 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 ZNF614Q8N883 585 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 COX18Q8N8Q8 333 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 CDRT4Q8N9R6 151 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 OR5W2Q8NH69 310 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 MAGEE2Q8TD90 523 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-233ENST00000489352 MGARPQ8TDB4 240 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 TMEM234Q8WY98 164 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 BCL2L2Q92843 193 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-233ENST00000489352 CHMP6Q96FZ7 201 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 UBXN10Q96LJ8 280 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 ATOH8Q96SQ7 321 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 BRF2Q9HAW0 419 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 MIEF1Q9NQG6 463 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 FZR1Q9UM11 496 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 REXO2Q9Y3B8 237 aaKnown RBP9.78□□□□□ -0.84
HDAC6-233ENST00000489352 INSIG2Q9Y5U4 225 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 CAPN6Q9Y6Q1 641 aa9.78□□□□□ -0.84
HDAC6-233ENST00000489352 HYDINQ4G0P3 5121 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 DNAH3Q8TD57 4116 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 EIF1BO60739 113 aaKnown RBP9.77□□□□□ -0.85
HDAC6-233ENST00000489352 CYP7B1O75881 506 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 ZNF432O94892 652 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 WISP3O95389 354 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-233ENST00000489352 PDYNP01213 254 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 ZNF12P17014 697 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 GLRXP35754 106 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 FOXB2Q5VYV0 432 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 PAQR6Q6TCH4 344 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 Q6YL49 198 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 USP51Q70EK9 711 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 MYPOPQ86VE0 399 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-233ENST00000489352 LRP11Q86VZ4 500 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 PDIK1LQ8N165 341 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 CDC26Q8NHZ8 85 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 TBC1D15Q8TC07 691 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 MAGOHBQ96A72 148 aaKnown RBP9.77□□□□□ -0.85
HDAC6-233ENST00000489352 FAM71F1Q96KD3 344 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-233ENST00000489352 HOXD1Q9GZZ0 328 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 IQCGQ9H095 443 aaKnown RBP9.77□□□□□ -0.85
HDAC6-233ENST00000489352 VPS11Q9H270 941 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 FARSBQ9NSD9 589 aaKnown RBP9.77□□□□□ -0.85
HDAC6-233ENST00000489352 VPS29Q9UBQ0 182 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 GRID1Q9ULK0 1009 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 SNX6Q9UNH7 406 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 POMT1Q9Y6A1 747 aa9.77□□□□□ -0.85
HDAC6-233ENST00000489352 TRAV40A0A0B4J280 105 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 C17orf100A8MU93 164 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 TRAPPC2LH3BP13 241 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 K7EIL1 84 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 OR7A17O14581 309 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 GPR37O15354 613 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 OIP5O43482 229 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 TRAF3IP2O43734 574 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-233ENST00000489352 FKBP2P26885 142 aaKnown RBP9.76□□□□□ -0.85
HDAC6-233ENST00000489352 SLC3A1Q07837 685 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 C2orf80Q0P641 193 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 LARS2Q15031 903 aaKnown RBP9.76□□□□□ -0.85
HDAC6-233ENST00000489352 NDUFAF6Q330K2 333 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 CCNJQ5T5M9 372 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 MEPCEQ7L2J0 689 aaKnown RBP9.76□□□□□ -0.85
HDAC6-233ENST00000489352 OR4S1Q8NGB4 309 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 OR10S1Q8NGN2 331 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 C16orf78Q8WTQ4 265 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 ST8SIA1Q92185 356 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 CCL17Q92583 94 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 DIRC2Q96SL1 478 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 GLIPR2Q9H4G4 154 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 HINT3Q9NQE9 182 aaKnown RBP9.76□□□□□ -0.85
HDAC6-233ENST00000489352 GIN1Q9NXP7 522 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 MYEF2Q9P2K5 600 aaKnown RBP9.76□□□□□ -0.85
HDAC6-233ENST00000489352 OR5V1Q9UGF6 321 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 HDGFL3Q9Y3E1 203 aa9.76□□□□□ -0.85
HDAC6-233ENST00000489352 TRIM49D1C9J1S8 452 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 ZNF264O43296 627 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 EIF4E2O60573 245 aaKnown RBP9.75□□□□□ -0.85
HDAC6-233ENST00000489352 PLATP00750 562 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 DDCP20711 480 aa9.75□□□□□ -0.85
HDAC6-233ENST00000489352 SH3BGRP55822 239 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms