RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 AGTR1P30556 359 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 PCYT1AP49585 367 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 SELENOWP63302 87 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 ALG10BQ5I7T1 473 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 C16orf89Q6UX73 402 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 CBLL1Q75N03 491 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 CARM1Q86X55 608 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 OR6K3Q8NGY3 331 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 MCHR1Q99705 422 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 ZNF426Q9BUY5 554 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 KLHL13Q9P2N7 655 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 SLC9A8Q9Y2E8 581 aa16.63■□□□□ 0.25
PTCD3-217ENST00000488801 IGKV3D-15A0A087WSY6 115 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 IGHV3-15A0A0B4J1V0 119 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 ZNF716A6NP11 495 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 MSTNO14793 375 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 CHP2O43745 196 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 PNMTP11086 282 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 TNFRSF1BP20333 461 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 COL8A1P27658 744 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 IDUAP35475 653 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 P2RY4P51582 365 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 SLC16A1P53985 500 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 PDK3Q15120 406 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 ENTPD8Q5MY95 495 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 SAMD4BQ5PRF9 694 aaKnown RBP16.62■□□□□ 0.25
PTCD3-217ENST00000488801 C1orf140Q5VVS0 124 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 HIST2H2BCQ6DN03 193 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 C5orf46Q6UWT4 87 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 BTLAQ7Z6A9 289 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 DEFB107AQ8IZN7 70 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 VANGL1Q8TAA9 524 aaPredicted RBP16.62■□□□□ 0.25
PTCD3-217ENST00000488801 ADAMTS16Q8TE57 1224 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 PROX1Q92786 737 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 SLC47A1Q96FL8 570 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 PRRG4Q9BZD6 226 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 POLR2J2Q9GZM3 115 aaKnown RBP16.62■□□□□ 0.25
PTCD3-217ENST00000488801 POLR2J3Q9H1A7 115 aaKnown RBP16.62■□□□□ 0.25
PTCD3-217ENST00000488801 TMEM27Q9HBJ8 222 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 ADA2Q9NZK5 511 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 RPS6KB2Q9UBS0 482 aa16.62■□□□□ 0.25
PTCD3-217ENST00000488801 HRNRQ86YZ3 2850 aaPredicted RBP16.62■□□□□ 0.25
PTCD3-217ENST00000488801 ELOA3DA6NLF2 546 aaPredicted RBP16.61■□□□□ 0.25
PTCD3-217ENST00000488801 A8MXE2 369 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 RAMP1O60894 148 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 CDH12P55289 794 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 SLC35A1P78382 337 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 CEACAM7Q14002 265 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 ELOA3BQ3SY89 546 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 PAQR6Q6TCH4 344 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 WDR88Q6ZMY6 472 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 RNF148Q8N7C7 305 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 ELOA3Q8NG57 546 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 RNASE6Q93091 150 aaKnown RBP16.61■□□□□ 0.25
PTCD3-217ENST00000488801 CDRT15Q96T59 188 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 SPOCK3Q9BQ16 436 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 TMEM43Q9BTV4 400 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 C1orf21Q9H246 121 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 KLHL9Q9P2J3 617 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 FOXD3Q9UJU5 478 aaPredicted RBP16.61■□□□□ 0.25
PTCD3-217ENST00000488801 CLEC4AQ9UMR7 237 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 SH3GLB1Q9Y371 365 aa16.61■□□□□ 0.25
PTCD3-217ENST00000488801 APCP25054 2843 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 TRAPPC13A5PLN9 417 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 CPSF4LA6NMK7 179 aaKnown RBP16.6■□□□□ 0.25
PTCD3-217ENST00000488801 ZNF724A8MTY0 619 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 B2RBV5 119 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 EIF1BO60739 113 aaKnown RBP16.6■□□□□ 0.25
PTCD3-217ENST00000488801 PRKD3O94806 890 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 NCK1P16333 377 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 SIRPAP78324 504 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 GTF2IRD2BQ6EKJ0 949 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 PPP4R4Q6NUP7 873 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 VTCN1Q7Z7D3 282 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 GTF2IRD2Q86UP8 949 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 ARHGAP24Q8N264 748 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 CNEP1R1Q8N9A8 125 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 FAM156AQ8NDB6 213 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 OR6S1Q8NH40 331 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 MFSD8Q8NHS3 518 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 KTI12Q96EK9 354 aaPredicted RBP16.6■□□□□ 0.25
PTCD3-217ENST00000488801 DNAJA3Q96EY1 480 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 PRSS27Q9BQR3 290 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 TACO1Q9BSH4 297 aaKnown RBP16.6■□□□□ 0.25
PTCD3-217ENST00000488801 GORASP2Q9H8Y8 452 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 PLSCR4Q9NRQ2 329 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 ADPRHL2Q9NX46 363 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 EGFL7Q9UHF1 273 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 EMC9Q9Y3B6 208 aa16.6■□□□□ 0.25
PTCD3-217ENST00000488801 FBN2P35556 2912 aa16.59■□□□□ 0.25
PTCD3-217ENST00000488801 AQP7P3A6NL99 342 aa16.59■□□□□ 0.25
PTCD3-217ENST00000488801 EEF1E1-BLOC1S5C9J1V9 151 aa16.59■□□□□ 0.25
PTCD3-217ENST00000488801 GSTA4O15217 222 aa16.59■□□□□ 0.25
PTCD3-217ENST00000488801 EEF1E1O43324 174 aaKnown RBP16.59■□□□□ 0.25
PTCD3-217ENST00000488801 UBOX5O94941 541 aa16.59■□□□□ 0.25
PTCD3-217ENST00000488801 SERPINA1P01009 418 aa16.59■□□□□ 0.25
PTCD3-217ENST00000488801 GPIP06744 558 aa16.59■□□□□ 0.25
PTCD3-217ENST00000488801 FPR1P21462 350 aa16.59■□□□□ 0.25
PTCD3-217ENST00000488801 OR1E2P47887 323 aa16.59■□□□□ 0.25
PTCD3-217ENST00000488801 SORDQ00796 357 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms