RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ZNF141Q15928 474 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 INAQ16352 499 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 KLHL26Q53HC5 615 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 PRR30Q53SZ7 412 aaPredicted RBP17.58■□□□□ 0.41
CCM2-216ENST00000488727 GATSQ8NAP1 163 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 SLC7A13Q8TCU3 470 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 TMEM41AQ96HV5 264 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 ARHGDIGQ99819 225 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 HOXD1Q9GZZ0 328 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 CLN6Q9NWW5 311 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 M0R082 166 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 SCDO00767 359 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 HPGDP15428 266 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 CD36P16671 472 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 C21orf33P30042 268 aaPredicted RBP17.58■□□□□ 0.4
CCM2-216ENST00000488727 SLC15A1P46059 708 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 NUDT6P53370 316 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 COX10Q12887 443 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 OR5M10Q6IEU7 315 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 PTCHD4Q6ZW05 846 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 STX19Q8N4C7 294 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 ZNF614Q8N883 585 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 WDSUB1Q8N9V3 476 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 FAM98AQ8NCA5 519 aaKnown RBP17.58■□□□□ 0.4
CCM2-216ENST00000488727 DYNC2LI1Q8TCX1 351 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 JSRP1Q96MG2 331 aaPredicted RBP17.58■□□□□ 0.4
CCM2-216ENST00000488727 CDCA4Q9BXL8 241 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 TTTY12Q9BZ98 90 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 MAN2C1Q9NTJ4 1040 aa17.58■□□□□ 0.4
CCM2-216ENST00000488727 A0A1W2PQD3 144 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 AGAP5A6NIR3 686 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 GNB5O14775 395 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 RFPL3SP0C7P2 107 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 RPS4Y1P22090 263 aaKnown RBP17.57■□□□□ 0.4
CCM2-216ENST00000488727 DGUOKQ16854 277 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 TMEM236Q5W0B7 351 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 PODNL1Q6PEZ8 512 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 CISD2Q8N5K1 135 aaKnown RBP17.57■□□□□ 0.4
CCM2-216ENST00000488727 ZNF527Q8NB42 609 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 OR6T1Q8NGN1 323 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 NDNFQ8TB73 568 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 FNDC11Q9BVV2 318 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 MTHFD2LQ9H903 347 aaPredicted RBP17.57■□□□□ 0.4
CCM2-216ENST00000488727 SLC25A19Q9HC21 320 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 SELENONQ9NZV5 590 aa17.57■□□□□ 0.4
CCM2-216ENST00000488727 M0R3G1 203 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 SNPHO15079 494 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 NDUFB5O43674 189 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 C1QL1O75973 258 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 GLSO94925 669 aaPredicted RBP17.56■□□□□ 0.4
CCM2-216ENST00000488727 TP53P04637 393 aaPredicted RBP17.56■□□□□ 0.4
CCM2-216ENST00000488727 STSP08842 583 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 ADORA3P0DMS8 318 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 SERPINB10P48595 397 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 ST3GAL4Q11206 333 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 PIN1Q13526 163 aaPredicted RBP17.56■□□□□ 0.4
CCM2-216ENST00000488727 TIGD6Q17RP2 521 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 ZNF367Q7RTV3 350 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 SLC46A3Q7Z3Q1 461 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 DUSP19Q8WTR2 217 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 SNRNP40Q96DI7 357 aaKnown RBP17.56■□□□□ 0.4
CCM2-216ENST00000488727 PLEKHA8Q96JA3 519 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 GNRHR2Q96P88 292 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 POLR2J3Q9H1A7 115 aaKnown RBP17.56■□□□□ 0.4
CCM2-216ENST00000488727 AMBNQ9NP70 447 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 ZFP64Q9NPA5 681 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 BOKQ9UMX3 212 aaPredicted RBP17.56■□□□□ 0.4
CCM2-216ENST00000488727 CFAP46Q8IYW2 2715 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 FREM3P0C091 2139 aa17.56■□□□□ 0.4
CCM2-216ENST00000488727 M0R129 80 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 PRKAR1BP31321 381 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 UGT2B10P36537 528 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 LIPAP38571 399 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 TIGD3Q6B0B8 471 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 C1orf94Q6P1W5 598 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 PMM1Q92871 262 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 Q96MT0 163 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 PPP4R1LQ9P1A2 415 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 SERINC4A6NH21 518 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 TTLL8A6PVC2 850 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 FAM166BA8MTA8 275 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 OIP5O43482 229 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 WISP2O76076 250 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 POU1F1P28069 291 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 VBP1P61758 197 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 PLGLB1Q02325 96 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 PLAURQ03405 335 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 FGFBP1Q14512 234 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 HYAL4Q2M3T9 481 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 NDUFAF6Q330K2 333 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 MEDAGQ5VYS4 303 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 OR4K5Q8NGD3 323 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 OR1J4Q8NGS1 313 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 PHOSPHO1Q8TCT1 267 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 LGALS12Q96DT0 336 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 ANKRD19PQ9H560 264 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 ZNF703Q9H7S9 590 aaPredicted RBP17.55■□□□□ 0.4
CCM2-216ENST00000488727 ETAA1Q9NY74 926 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 FBXL2Q9UKC9 423 aa17.55■□□□□ 0.4
CCM2-216ENST00000488727 HEATR5AQ86XA9 2040 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms