RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 PRSS44E7EML9 344 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 EEF1E1O43324 174 aaKnown RBP17.48■□□□□ 0.39
SEC22A-208ENST00000487572 AHSA1O95433 338 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 IFNW1P05000 195 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 FPR1P21462 350 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 RPS5P46782 204 aaKnown RBP17.48■□□□□ 0.39
SEC22A-208ENST00000487572 YAP1P46937 504 aaKnown RBP17.48■□□□□ 0.39
SEC22A-208ENST00000487572 SLC35A1P78382 337 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 BNIP1Q12981 228 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 SLC25A35Q3KQZ1 300 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 SWT1Q5T5J6 900 aaKnown RBP17.48■□□□□ 0.39
SEC22A-208ENST00000487572 FAM86B1Q8N7N1 296 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 STK35Q8TDR2 534 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 CCDC124Q96CT7 223 aaKnown RBP17.48■□□□□ 0.39
SEC22A-208ENST00000487572 KTI12Q96EK9 354 aaPredicted RBP17.48■□□□□ 0.39
SEC22A-208ENST00000487572 SLC41A3Q96GZ6 507 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 TAPBPLQ9BX59 468 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 GORASP2Q9H8Y8 452 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 SAMD4AQ9UPU9 718 aaKnown RBP17.48■□□□□ 0.39
SEC22A-208ENST00000487572 TRAPPC4Q9Y296 219 aa17.48■□□□□ 0.39
SEC22A-208ENST00000487572 DOPEY1Q5JWR5 2465 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 IGKV1D-42A0A075B6H8 117 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 LIPT2A6NK58 231 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 CHP2O43745 196 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 NPIPB7O75200 414 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 TNFSF13O75888 250 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 PRKD3O94806 890 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 IL18BPO95998 194 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 THY1P04216 161 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 GPIP06744 558 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 CRHP06850 196 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 CTBP2P56545 445 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 EGR4Q05215 589 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 PIN1Q13526 163 aaPredicted RBP17.47■□□□□ 0.39
SEC22A-208ENST00000487572 RNPS1Q15287 305 aaKnown RBP17.47■□□□□ 0.39
SEC22A-208ENST00000487572 DNAL1Q4LDG9 190 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 GTF2IRD2BQ6EKJ0 949 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 VWA1Q6PCB0 445 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 CYP2R1Q6VVX0 501 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 MAMDC2Q7Z304 686 aaPredicted RBP17.47■□□□□ 0.39
SEC22A-208ENST00000487572 GDF7Q7Z4P5 450 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 GTF2IRD2Q86UP8 949 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 SLC25A36Q96CQ1 311 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 SLC7A6OSQ96CW6 309 aaPredicted RBP17.47■□□□□ 0.39
SEC22A-208ENST00000487572 GMPPAQ96IJ6 420 aaPredicted RBP17.47■□□□□ 0.39
SEC22A-208ENST00000487572 AMBRA1Q9C0C7 1298 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 KLHL13Q9P2N7 655 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 DOCK7Q96N67 2140 aa17.47■□□□□ 0.39
SEC22A-208ENST00000487572 ZNF814B7Z6K7 855 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 SS18L1O75177 396 aaPredicted RBP17.46■□□□□ 0.39
SEC22A-208ENST00000487572 SMNDC1O75940 238 aaKnown RBP eCLIP17.46■□□□□ 0.39
SEC22A-208ENST00000487572 LYPD3O95274 346 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 ATP6V1B2P21281 511 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 KIR2DL2P43627 348 aaPredicted RBP17.46■□□□□ 0.39
SEC22A-208ENST00000487572 RASGEF1BQ0VAM2 473 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 WDR88Q6ZMY6 472 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 FAM214BQ7L5A3 538 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 CCDC103Q8IW40 242 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 SLC43A2Q8N370 569 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 BTBD10Q9BSF8 475 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 NAA11Q9BSU3 229 aaPredicted RBP17.46■□□□□ 0.39
SEC22A-208ENST00000487572 PLEKHB1Q9UF11 243 aaPredicted RBP17.46■□□□□ 0.39
SEC22A-208ENST00000487572 RIMS3Q9UJD0 308 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 EMC9Q9Y3B6 208 aa17.46■□□□□ 0.39
SEC22A-208ENST00000487572 PCNX1Q96RV3 2341 aa17.46■□□□□ 0.38
SEC22A-208ENST00000487572 BAHCC1Q9P281 2608 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 TRAV36DV7A0A075B6V5 113 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 J3KTA2 159 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 KPNA4O00629 521 aaPredicted RBP17.45■□□□□ 0.38
SEC22A-208ENST00000487572 DNPH1O43598 174 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 EIF1BO60739 113 aaKnown RBP17.45■□□□□ 0.38
SEC22A-208ENST00000487572 CYTIPO60759 359 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 RAMP1O60894 148 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 AKR7A3O95154 331 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 OR5F1O95221 314 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 CBLP22681 906 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 GRNP28799 593 aaKnown RBP17.45■□□□□ 0.38
SEC22A-208ENST00000487572 C5orf46Q6UWT4 87 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 BTLAQ7Z6A9 289 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 LUZP2Q86TE4 346 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 TUSC5Q8IXB3 177 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 C10orf53Q8N6V4 93 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 TAAR8Q969N4 342 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 ZNF775Q96BV0 537 aaPredicted RBP17.45■□□□□ 0.38
SEC22A-208ENST00000487572 STARD4Q96DR4 205 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 PRRC1Q96M27 445 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 EPYCQ99645 322 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 PTDSS2Q9BVG9 487 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 POLR2J2Q9GZM3 115 aaKnown RBP17.45■□□□□ 0.38
SEC22A-208ENST00000487572 POLR2J3Q9H1A7 115 aaKnown RBP17.45■□□□□ 0.38
SEC22A-208ENST00000487572 GLRX2Q9NS18 164 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 ACTR3BQ9P1U1 418 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 KLHL9Q9P2J3 617 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 RHCGQ9UBD6 479 aa17.45■□□□□ 0.38
SEC22A-208ENST00000487572 KLF2Q9Y5W3 355 aaPredicted RBP17.45■□□□□ 0.38
SEC22A-208ENST00000487572 GTF2E2P29084 291 aaKnown RBP17.44■□□□□ 0.38
SEC22A-208ENST00000487572 AGTR1P30556 359 aa17.44■□□□□ 0.38
SEC22A-208ENST00000487572 TRIM25Q14258 630 aaKnown RBP17.44■□□□□ 0.38
SEC22A-208ENST00000487572 GUSBP1Q15486 140 aa17.44■□□□□ 0.38
SEC22A-208ENST00000487572 TMEM201Q5SNT2 666 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms